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玉米丝特异启动子 ZmbZIP25 的功能分析。

Functional Analysis of Maize Silk-Specific ZmbZIP25 Promoter.

机构信息

State Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, China.

出版信息

Int J Mol Sci. 2018 Mar 12;19(3):822. doi: 10.3390/ijms19030822.

DOI:10.3390/ijms19030822
PMID:29534529
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5877683/
Abstract

ZmbZIP25 ( bZIP (basic leucine zipper) transcription factor 25) is a function-unknown protein that belongs to the D group of the bZIP transcription factor family. RNA-seq data showed that the expression of was tissue-specific in maize silks, and this specificity was confirmed by RT-PCR (reverse transcription-polymerase chain reaction). In situ RNA hybridization showed that was expressed exclusively in the xylem of maize silks. A 5' RACE (rapid amplification of cDNA ends) assay identified an adenine residue as the transcription start site of the gene. To characterize this silk-specific promoter, we isolated and analyzed a 2450 bp (from -2083 to +367) and a 2600 bp sequence of (from -2083 to +517, the transcription start site was denoted +1). Stable expression assays in showed that the expression of the reporter gene driven by the 2450 bp 5'-flanking fragment occurred exclusively in the papillae of stigmas. Furthermore, transient expression assays in maize indicated that and expression driven by the 2450 bp 5'-flanking sequences occurred only in maize silks and not in other tissues. However, no or expression was driven by the 2600 bp 5'-flanking sequences in either stable or transient expression assays. A series of deletion analyses of the 2450 bp 5'-flanking sequence was performed in transgenic plants, and probable elements prediction analysis revealed the possible presence of negative regulatory elements within the 161 bp region from -1117 to -957 that were responsible for the specificity of the 5'-flanking sequence.

摘要

Zm bZIP25(bZIP(碱性亮氨酸拉链)转录因子 25)是一种功能未知的蛋白质,属于 bZIP 转录因子家族的 D 组。RNA-seq 数据显示,在玉米花丝中, 的表达具有组织特异性,这一特异性通过 RT-PCR(逆转录-聚合酶链反应)得到了证实。原位 RNA 杂交显示, 在玉米花丝的木质部中特异性表达。5'RACE(cDNA 末端快速扩增)实验确定了腺嘌呤残基是 基因的转录起始位点。为了表征这种丝特异启动子,我们分离并分析了一个 2450bp(-2083 到+367)和一个 2600bp 序列的 (-2083 到+517,转录起始位点记为+1)。在 中稳定表达实验表明,由 2450bp 5'侧翼片段驱动的报告基因 的表达仅发生在柱头的乳突中。此外,在玉米中的瞬时表达实验表明,由 2450bp 5'侧翼序列驱动的 和 表达仅发生在玉米花丝中,而不在其他组织中发生。然而,在稳定或瞬时表达实验中,由 2600bp 5'侧翼序列驱动的 或 表达都没有发生。对 2450bp 5'侧翼序列进行了一系列缺失分析,在转基因 植物中进行了实验,可能的元件预测分析表明,在-1117 到-957 的 161bp 区域内可能存在负调控元件,这些元件负责 5'侧翼序列的特异性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/8026d383b2ae/ijms-19-00822-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/15e2d4f3389b/ijms-19-00822-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/3293dd9feef2/ijms-19-00822-g002.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/dc3f2dd5471d/ijms-19-00822-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/cb6141b9bda7/ijms-19-00822-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/201f3b584519/ijms-19-00822-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/7ba2a040d35d/ijms-19-00822-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/826ef29023f8/ijms-19-00822-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/8026d383b2ae/ijms-19-00822-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/15e2d4f3389b/ijms-19-00822-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/3293dd9feef2/ijms-19-00822-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/050ab6649b96/ijms-19-00822-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/dc3f2dd5471d/ijms-19-00822-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/cb6141b9bda7/ijms-19-00822-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/201f3b584519/ijms-19-00822-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/7ba2a040d35d/ijms-19-00822-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/826ef29023f8/ijms-19-00822-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aace/5877683/8026d383b2ae/ijms-19-00822-g009.jpg

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