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印度北部一家医院新生儿重症监护病房肠杆菌科细菌中变异株的出现情况

Occurrence of Variants Among Enterobacteriaceae From a Neonatal Intensive Care Unit in a Northern India Hospital.

作者信息

Ahmad Nayeem, Khalid Shamsi, Ali Syed M, Khan Asad U

机构信息

Interdisciplinary Biotechnology Unit, Medical Microbiology and Molecular Biology Lab, Aligarh Muslim University, Aligarh, India.

Pediatrics Department, Jawaharlal Nehru Medical College, Aligarh Muslim University, Aligarh, India.

出版信息

Front Microbiol. 2018 Mar 7;9:407. doi: 10.3389/fmicb.2018.00407. eCollection 2018.

Abstract

Carbapenem-resistance among enterobacteriaceae has become a global health concern. The objective of this study was to understand NDM producing enterobacteriaceae and their genetic basis of resistance, spreading in neonatal intensive care unit. Carbapenem resistant NDM producing enterobacteriaceae isolates were recovered from rectal swab and blood sample of infants admitted in NICU. These were determined by using Carba-NP test. All isolates were identified using BD Phoenix and MICs were determined by broth microdilution method. The and associated resistant markers were checked by PCR followed by sequencing. Moreover, ERIC-PCR and genetic environment of gene were also performed for the analysis of clonal relationship and genetic surrounding of the strains. We characterized 44 isolates with variants in (45.5%), (40.9%), (4.5%), (2.3%), (2.3%), (2.3%), (2.2%) from NICU, showing resistance against all antibiotics except colistin and polymixin B. IS and bleomycin gene were found surrounding all variants, besides class I integron on plasmid. (ERIC)-PCR data revealed non-clonal relatedness among most of the isolates. The transfer of resistant markers was confirmed by conjugation experiment. The PCR-based replicon typing was carried out using DNA of transconjugants. These isolates carried NDM-1 (20.45%), NDM-4 (36.36%), NDM-5 (38.64%), NDM-7 (4.55%), along with OXA, CMY, and SHV variants on conjugative plasmid of IncFIA, IncFIC, IncF, IncK, IncFIB, IncB/O, IncHI1, IncP, IncY, IncFIIA, IncI1, and IncN types. An increased number of carbapenem-resistant NDM producing enterobacteriaceae isolates recovered from NICU which is alarming signal for health workers and policy makers. Hence, it is utmost important to think about infection control measures.

摘要

肠杆菌科细菌对碳青霉烯类抗生素的耐药性已成为全球卫生关注的问题。本研究的目的是了解产NDM的肠杆菌科细菌及其耐药的遗传基础,以及它们在新生儿重症监护病房中的传播情况。从入住新生儿重症监护病房的婴儿的直肠拭子和血液样本中分离出产碳青霉烯酶NDM的耐碳青霉烯类肠杆菌科细菌。通过Carba-NP试验对这些细菌进行鉴定。使用BD Phoenix鉴定所有分离株,并通过肉汤微量稀释法测定最低抑菌浓度(MIC)。通过PCR随后测序检查blaNDM及其相关耐药标记。此外,还进行了ERIC-PCR和blaNDM基因的遗传环境分析,以分析菌株的克隆关系和遗传背景。我们对从新生儿重症监护病房分离出的44株菌株进行了特征分析,其中blaNDM变体有:blaNDM-1(45.5%)、blaNDM-4(40.9%)、blaNDM-5(4.5%)、blaNDM-7(2.3%)、blaOXA、blaCMY、blaSHV变体(各2.3%)、blaVIM(2.2%),这些菌株对除黏菌素和多黏菌素B之外的所有抗生素均表现出耐药性。除了质粒上的I类整合子外,在所有blaNDM变体周围均发现了插入序列(IS)和博来霉素基因。ERIC-PCR数据显示大多数分离株之间无克隆相关性。通过接合实验证实了耐药标记的转移。使用转接合子的DNA进行基于PCR的复制子分型。这些分离株携带NDM-1(20.45%)、NDM-4(36.36%)、NDM-5(38.64%)、NDM-7(4.55%),以及IncFIA、IncFIC、IncF、IncK、IncFIB、IncB/O、IncHI1、IncP、IncY、IncFIIA、IncI1和IncN型接合性质粒上的OXA、CMY和SHV变体。从新生儿重症监护病房分离出的产碳青霉烯酶NDM的耐碳青霉烯类肠杆菌科细菌数量增加,这对卫生工作者和政策制定者来说是一个警示信号。因此,考虑感染控制措施至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3949/5845868/a490b05b4c4f/fmicb-09-00407-g0001.jpg

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