Centre for Innovative Research, Medical University of Bialystok, Białystok, Poland.
I-BioStat, Hasselt University, Hasselt, Belgium.
Cell Biol Toxicol. 2018 Oct;34(5):381-404. doi: 10.1007/s10565-018-9428-y. Epub 2018 Mar 22.
Genome is a complex hierarchical structure, and its spatial organization plays an important role in its function. Chromatin loops and topological domains form the basic structural units of this multiscale organization and are essential to orchestrate complex regulatory networks and transcription mechanisms. They also form higher-order structures such as chromosomal compartments and chromosome territories. Each level of this intrinsic architecture is governed by principles and mechanisms that we only start to understand. In this review, we summarize the current view of the genome architecture on the scales ranging from chromatin loops to the whole genome. We describe cell-to-cell variability, links between genome reorganization and various genomic processes, such as chromosome X inactivation and cell differentiation, and the interplay between different experimental techniques.
基因组是一个复杂的层次结构,其空间组织在功能中起着重要作用。染色质环和拓扑结构域形成了这种多尺度组织的基本结构单元,对于协调复杂的调控网络和转录机制至关重要。它们还形成了更高阶的结构,如染色质区室和染色体区域。这种内在结构的每一个层次都受到我们才刚刚开始理解的原理和机制的控制。在这篇综述中,我们总结了从染色质环到整个基因组范围内基因组结构的最新观点。我们描述了细胞间的可变性、基因组重排与各种基因组过程(如 X 染色体失活和细胞分化)之间的联系,以及不同实验技术之间的相互作用。