• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

副溶血性弧菌感染的斑马鱼(Danio rerio)幼体的差异转录组分析

Differential transcriptome analysis of zebrafish (Danio rerio) larvae challenged by Vibrio parahaemolyticus.

作者信息

Zhang Qinghua, Ji Ce, Ren Jianfeng, Zhang Qiuyue, Dong Xuehong, Zu Yao, Jia Liang, Li Weiming

机构信息

Key Laboratory of Exploration and Utilization of Aquatic Genetic Resources, Ministry of Education, Shanghai Ocean University, Shanghai, China.

International Research Center for Marine Biosciences, Ministry of Science and Technology, Shanghai Ocean University, Shanghai, China.

出版信息

J Fish Dis. 2018 Jul;41(7):1049-1062. doi: 10.1111/jfd.12796. Epub 2018 Mar 23.

DOI:10.1111/jfd.12796
PMID:29572872
Abstract

Zebrafish embryo and larva represent a useful in vivo model for identification of host innate immune responses to bacterial infection. Vibrio parahaemolyticus is a typical zoonotic pathogen worldwide that causes acute gastroenteritis in humans and vibriosis in fishes. However, the mechanism of the innate immune response in the zebrafish larvae infected by V. parahaemolyticus has not been clear. We analysed the transcriptomic profile of 3 days post-fertilization (dpf) zebrafish larvae immersed in V. parahaemolyticus 13 (Vp13) strain suspension for 2 hr. A total of 602 differentially expressed genes (DEGs) were identified in the infection group, of which 175 (29.07%) genes were upregulated and 427 (70.93%) genes were downregulated. These altered genes encoded complement and coagulation cascades, chemokine, TNF signalling pathway, NF-κB signalling pathway and JAK-STAT signalling pathway. Some significant DEGs, such as mmp13, cxcr4a, ccl20, hsp70, gngt, serpina1l, il8, cofilin and il11, were subjected to quantitative gene expression analysis, and the results were consistent with those of the transcriptome profile. These results clearly demonstrated that exposure to V. parahaemolyticus for 2 hr could activate innate immune response in 3dpf larvae by altered expression of downstream signalling pathway genes of pattern recognition receptors (PRRs). Our results also provide a useful reference for future analysis of signal transduction pathways and pathogenesis mechanisms underlying the systemic innate immune response to the external bacteria of V. parahaemolyticus.

摘要

斑马鱼胚胎和幼体是用于鉴定宿主对细菌感染的固有免疫反应的一种有用的体内模型。副溶血性弧菌是一种典型的全球人畜共患病原体,可导致人类急性肠胃炎和鱼类弧菌病。然而,副溶血性弧菌感染的斑马鱼幼体中固有免疫反应的机制尚不清楚。我们分析了受精后3天(dpf)的斑马鱼幼体在副溶血性弧菌13(Vp13)菌株悬液中浸泡2小时后的转录组概况。在感染组中总共鉴定出602个差异表达基因(DEG),其中175个(29.07%)基因上调,427个(70.93%)基因下调。这些改变的基因编码补体和凝血级联、趋化因子、TNF信号通路、NF-κB信号通路和JAK-STAT信号通路。对一些显著的DEG,如mmp13、cxcr4a、ccl20、hsp70、gngt、serpina1l、il8、cofilin和il11进行了基因表达定量分析,结果与转录组概况一致。这些结果清楚地表明,暴露于副溶血性弧菌2小时可通过模式识别受体(PRR)下游信号通路基因的表达改变激活3dpf幼体的固有免疫反应。我们的结果也为未来分析副溶血性弧菌对外界细菌的全身固有免疫反应的信号转导途径和发病机制提供了有用的参考。

相似文献

1
Differential transcriptome analysis of zebrafish (Danio rerio) larvae challenged by Vibrio parahaemolyticus.副溶血性弧菌感染的斑马鱼(Danio rerio)幼体的差异转录组分析
J Fish Dis. 2018 Jul;41(7):1049-1062. doi: 10.1111/jfd.12796. Epub 2018 Mar 23.
2
Notch1a can widely mediate innate immune responses in zebrafish larvae infected with Vibrio parahaemolyticus.Notch1a 可广泛介导感染副溶血弧菌的斑马鱼幼虫的固有免疫反应。
Fish Shellfish Immunol. 2019 Sep;92:680-689. doi: 10.1016/j.fsi.2019.06.058. Epub 2019 Jul 1.
3
Transcriptomic analysis of microRNAs-mRNAs regulating innate immune response of zebrafish larvae against Vibrio parahaemolyticus infection.miRNAs-mRNAs 转录组分析调控斑马鱼幼虫先天免疫反应抵抗副溶血弧菌感染
Fish Shellfish Immunol. 2019 Aug;91:333-342. doi: 10.1016/j.fsi.2019.05.050. Epub 2019 May 23.
4
Transcriptomic characterization of adult zebrafish infected with Streptococcus agalactiae.转录组学分析感染无乳链球菌的成年斑马鱼。
Fish Shellfish Immunol. 2019 Nov;94:355-372. doi: 10.1016/j.fsi.2019.09.040. Epub 2019 Sep 15.
5
Liver transcriptome analysis of the Sparus macrocephlus in response to Vibrio parahaemolyticus infection.大黄鱼肝脏转录组分析对副溶血弧菌感染的反应。
Fish Shellfish Immunol. 2019 Jan;84:825-833. doi: 10.1016/j.fsi.2018.09.057. Epub 2018 Sep 21.
6
23S rRNA from Vibrio parahaemolyticus regulates the innate immune response via recognition by TLR13 in orange-spotted grouper (Epinephelus coioides).副溶血弧菌 23S rRNA 通过 TLR13 识别调控石斑鱼固有免疫反应。
Dev Comp Immunol. 2021 Jan;114:103837. doi: 10.1016/j.dci.2020.103837. Epub 2020 Aug 23.
7
Zebrafish as a useful model for zoonotic Vibrio parahaemolyticus pathogenicity in fish and human.斑马鱼作为鱼类和人类中致病性副溶血性弧菌人兽共患病的有用模型。
Dev Comp Immunol. 2016 Feb;55:159-68. doi: 10.1016/j.dci.2015.10.021. Epub 2015 Oct 28.
8
Hepatopancreatic transcriptome analysis and humoral immune factor assays in red claw crayfish (Cherax quadricarinatus) provide insight into innate immunomodulation under Vibrio parahaemolyticus infection.肝胰腺转录组分析和体液免疫因子检测揭示了凡纳滨对虾(Cherax quadricarinatus)在副溶血弧菌感染下的先天免疫调节机制。
Ecotoxicol Environ Saf. 2021 Jul 1;217:112266. doi: 10.1016/j.ecoenv.2021.112266. Epub 2021 Apr 27.
9
Comparative transcriptomic analysis provides insights into antibacterial mechanisms of Branchiostoma belcheri under Vibrio parahaemolyticus infection.比较转录组分析为藤壶在副溶血弧菌感染下的抗菌机制提供了新的见解。
Fish Shellfish Immunol. 2018 May;76:196-205. doi: 10.1016/j.fsi.2018.03.007. Epub 2018 Mar 3.
10
Effects of Vibrio parahaemolyticus infection on physiological response, histopathology and transcriptome changes in the mud crab (Scylla paramamosain).副溶血弧菌感染对泥蟹(锯缘青蟹)生理反应、组织病理学和转录组变化的影响。
Fish Shellfish Immunol. 2020 Nov;106:197-204. doi: 10.1016/j.fsi.2020.07.061. Epub 2020 Aug 7.

引用本文的文献

1
Zebrafish Models for Pathogenic Vibrios.斑马鱼模型用于致病性弧菌研究。
J Bacteriol. 2020 Nov 19;202(24). doi: 10.1128/JB.00165-20.
2
Evaluation of two independent protocols for the extraction of DNA and RNA from different tissues of sea cucumber .评估从海参不同组织中提取DNA和RNA的两种独立方案。
MethodsX. 2019 Jul 12;6:1627-1634. doi: 10.1016/j.mex.2019.07.010. eCollection 2019.
3
Comparative Study of Immune Reaction Against Bacterial Infection From Transcriptome Analysis.基于转录组分析的细菌感染免疫反应比较研究。
Front Immunol. 2019 Feb 5;10:153. doi: 10.3389/fimmu.2019.00153. eCollection 2019.