SPV：一个 JavaScript 信号通路可视化工具。
SPV: a JavaScript Signaling Pathway Visualizer.
机构信息
Bioinformatics and Computational Biology Unit, Department of Biology, University of Rome 'Tor Vergata', Rome, Italy.
出版信息
Bioinformatics. 2018 Aug 1;34(15):2684-2686. doi: 10.1093/bioinformatics/bty188.
SUMMARY
The visualization of molecular interactions annotated in web resources is useful to offer to users such information in a clear intuitive layout. These interactions are frequently represented as binary interactions that are laid out in free space where, different entities, cellular compartments and interaction types are hardly distinguishable. Signaling Pathway Visualizer is a free open source JavaScript library, which offers a series of pre-defined elements, compartments and interaction types meant to facilitate the representation of signaling pathways consisting of causal interactions without neglecting simple protein-protein interaction networks.
AVAILABILITY AND IMPLEMENTATION
Freely available under Apache version 2 license; Source code: https://github.com/Sinnefa/SPV_Signaling_Pathway_Visualizer_v1.0. Language: JavaScript; Web technology: Scalable Vector Graphics; Libraries: D3.js.
摘要
将网络资源中注释的分子相互作用可视化，以便为用户提供清晰直观的布局信息非常有用。这些相互作用通常表示为二进制相互作用，这些相互作用以自由空间的形式呈现，在这种形式中，不同的实体、细胞区室和相互作用类型很难区分。信号通路可视化器（Signaling Pathway Visualizer）是一个免费的开源 JavaScript 库，它提供了一系列预定义的元素、区室和相互作用类型，旨在方便表示由因果相互作用组成的信号通路，同时不忽略简单的蛋白质-蛋白质相互作用网络。
可用性和实现
根据 Apache 版本 2 许可证免费提供；源代码：https://github.com/Sinnefa/SPV_Signaling_Pathway_Visualizer_v1.0. 语言：JavaScript；Web 技术：可伸缩矢量图形；库：D3.js。
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