Lu Heng, Chen Yi, Li Linlin
Department of Cardiovascular Surgery, Union Hospital, Fujian Medical University, Fuzhou, China.
Department of Nephrology, Union Hospital, Fujian Medical University, Fuzhou, China.
Int J Genomics. 2018 Feb 11;2018:9025841. doi: 10.1155/2018/9025841. eCollection 2018.
Coronary artery disease (CAD) is one of the leading threats to global health. Previous research has proven that metabolic pathway disorders, such as high blood lipids and diabetes, are one of the risk factors that mostly cause CAD. However, the crosstalk between metabolic pathways and CAD was mostly studied on physiology processes by analyzing a single gene function. A canonical correlation analysis was used to identify the metabolic pathways, which were integrated as a unit to coexpress with CAD susceptibility genes, and to resolve additional metabolic factors that are related to CAD. Seven pathways, including citrate cycle, ubiquinone, terpenoid quinone biosynthesis, and N-glycan biosynthesis, were identified as an integrated unit coexpressed with CAD genes. These pathways could not be revealed as a coexpressed pathway through traditional methods as each single gene has weak correlation. Furthermore, sets of genes in these pathways were candidate markers for diagnosis and detection from patients' serum.
冠状动脉疾病(CAD)是全球健康面临的主要威胁之一。先前的研究已经证明,代谢途径紊乱,如高血脂和糖尿病,是导致CAD的主要危险因素之一。然而,代谢途径与CAD之间的相互作用大多是通过分析单个基因功能在生理过程中进行研究的。采用典型相关分析来识别代谢途径,这些代谢途径被整合为一个单元与CAD易感基因共表达,并解析与CAD相关的其他代谢因素。包括柠檬酸循环、泛醌、萜类醌生物合成和N-聚糖生物合成在内的七条途径被确定为与CAD基因共表达的一个整合单元。由于每个单个基因的相关性较弱,这些途径无法通过传统方法揭示为共表达途径。此外,这些途径中的基因集是患者血清诊断和检测的候选标志物。