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蜡样芽孢杆菌BC04的基因组序列及比较分析揭示了其遗传多样性和抗菌耐药性的改变。

Genome sequence and comparative analysis of Bacillus cereus BC04, reveals genetic diversity and alterations for antimicrobial resistance.

作者信息

Srinivasan Vijaya Bharathi, Angrasan Mahavinod, Chandel Neha, Rajamohan Govindan

机构信息

Bacterial Signaling and Drug Resistance Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, 160036, India.

出版信息

Funct Integr Genomics. 2018 Jul;18(4):477-487. doi: 10.1007/s10142-018-0600-5. Epub 2018 Apr 4.

Abstract

In this study, we delineated the genome sequence of a Bacillus cereus strain BC04 isolated from a stool sample in India. The draft genome is 5.1 Mb in size and consists of total 109 scaffolds, GC content is 35.2% with 5182 coding genes. The comparative analysis with other completely sequenced genomes highlights the unique presence of genomic islands, hemolysin, capsular synthetic protein, modifying enzymes accC7 and catA15, regulators of antibiotic resistance MarR and LysR with annotated functions related to virulence, stress response, and antimicrobial resistance. Overall, this study not only signifies the genetic diversity in gut isolate BC04 in particular, but also pinpoints the presence of unique genes possessed by B. cereus which can be pertinently exploited to design novel drugs and intervention strategies for the treatment of food borne diseases.

摘要

在本研究中,我们描绘了从印度一份粪便样本中分离出的蜡样芽孢杆菌菌株BC04的基因组序列。基因组草图大小为5.1 Mb,由总共109个支架组成,GC含量为35.2%,有5182个编码基因。与其他已完全测序的基因组进行比较分析,突出显示了基因组岛、溶血素、荚膜合成蛋白、修饰酶accC7和catA15、抗生素抗性调节因子MarR和LysR的独特存在,这些基因具有与毒力、应激反应和抗菌抗性相关的注释功能。总体而言,本研究不仅特别表明了肠道分离株BC04中的遗传多样性,还指出了蜡样芽孢杆菌所拥有的独特基因,这些基因可被针对性地用于设计治疗食源性疾病的新型药物和干预策略。

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