Miller Rachel A, Beno Sarah M, Kent David J, Carroll Laura M, Martin Nicole H, Boor Kathryn J, Kovac Jasna
Department of Food Science, Cornell University, Ithaca, NY 14853, USA.
Int J Syst Evol Microbiol. 2016 Nov;66(11):4744-4753. doi: 10.1099/ijsem.0.001421. Epub 2016 Aug 12.
A facultatively anaerobic, spore-forming Bacillus strain, FSL W8-0169T, collected from raw milk stored in a silo at a dairy powder processing plant in the north-eastern USA was initially identified as a Bacillus cereus group species based on a partial sequence of the rpoB gene and 16S rRNA gene sequence. Analysis of core genome single nucleotide polymorphisms clustered this strain separately from known B. cereus group species. Pairwise average nucleotide identity blast values obtained for FSL W8-0169T compared to the type strains of existing B. cereus group species were <95 % and predicted DNA-DNA hybridization values were <70 %, suggesting that this strain represents a novel B. cereus group species. We characterized 10 additional strains with the same or closely related rpoB allelic type, by whole genome sequencing and phenotypic analyses. Phenotypic characterization identified a higher content of iso-C16 : 0 fatty acid and the combined inability to ferment sucrose or to hydrolyse arginine as the key characteristics differentiating FSL W8-0169T from other B. cereus group species. FSL W8-0169T is psychrotolerant, produces haemolysin BL and non-haemolytic enterotoxin, and is cytotoxic in a HeLa cell model. The name Bacillus wiedmannii sp. nov. is proposed for the novel species represented by the type strain FSL W8-0169T (=DSM 102050T=LMG 29269T).
从美国东北部一家奶粉加工厂青贮窖中储存的原料奶中分离出的一株兼性厌氧、产芽孢的芽孢杆菌菌株FSL W8-0169T,最初基于rpoB基因部分序列和16S rRNA基因序列被鉴定为蜡样芽孢杆菌群物种。核心基因组单核苷酸多态性分析将该菌株与已知的蜡样芽孢杆菌群物种分开聚类。与现有蜡样芽孢杆菌群物种模式菌株相比,FSL W8-0169T获得的成对平均核苷酸同一性blast值<95%,预测的DNA-DNA杂交值<70%,表明该菌株代表一个新的蜡样芽孢杆菌群物种。我们通过全基因组测序和表型分析对另外10株具有相同或密切相关rpoB等位基因类型的菌株进行了特征描述。表型特征鉴定出较高含量的异-C16:0脂肪酸以及不能发酵蔗糖或水解精氨酸的组合,这是区分FSL W8-0169T与其他蜡样芽孢杆菌群物种的关键特征。FSL W8-0169T具有耐冷性,产生溶血素BL和非溶血肠毒素,并且在HeLa细胞模型中具有细胞毒性。提议将由模式菌株FSL W8-0169T(=DSM 102050T=LMG 29269T)代表的新物种命名为维德曼芽孢杆菌(Bacillus wiedmannii sp. nov.)。