Mariner Peter D, Korst Armin, Karimpour-Fard Anis, Stauffer Brian L, Miyamoto Shelley D, Sucharov Carmen C
Coramir Biomedical, Superior, CO 80027, United States.
Department of Medicine, Division of Cardiology, University of Colorado Denver, Anschutz Medical Campus, Aurora, CO 80045, United States.
Microrna. 2018;7(2):138-147. doi: 10.2174/2211536607666180416152112.
The measurement of circulating miRNAs has proven to be a powerful biomarker tool for several disease processes. Current protocols for the detection of miRNAs usually involve an RNA extraction step, requiring a substantial volume of patient serum or plasma to obtain sufficient input material.
Here, we describe a novel methodology that allows detection of a large number of miRNAs from a small volume of serum or plasma without the need for RNA extraction.
Three μl of serum or plasma was subjected to three cycles of high and low temperatures (heat/freeze cycles) followed by miRNA arrays.
Our results indicate that miRNA detection following this process is highly reproducible when comparing multiple samples from the same subject. Moreover, this protocol increases the reproducibility of miRNA detection in samples that were previously subjected to multiple freeze-thaw cycles. Importantly, the detection of miRNAs from serum vs. plasma following heat/freeze cycling are highly comparable, indicating that this heat/freeze process effectively eliminates differences in detection between serum and plasma samples that have been reported using other sample preparation methodologies.
We propose that this method is a potent alternative to current RNA extraction protocols, substantially reducing the amount of sample necessary for miRNA detection while simultaneously improving miRNA detection and reproducibility.
循环微小RNA(miRNA)的检测已被证明是用于多种疾病进程的强大生物标志物工具。当前检测miRNA的方案通常涉及RNA提取步骤,需要大量患者血清或血浆以获得足够的输入材料。
在此,我们描述一种新方法,可从少量血清或血浆中检测大量miRNA,而无需进行RNA提取。
取3μl血清或血浆进行三个高低温循环(热/冻循环),随后进行miRNA阵列检测。
我们的结果表明,当比较来自同一受试者的多个样本时,此过程后的miRNA检测具有高度可重复性。此外,该方案提高了先前经过多次冻融循环的样本中miRNA检测的可重复性。重要的是,热/冻循环后血清与血浆中miRNA的检测具有高度可比性,表明这种热/冻过程有效消除了使用其他样本制备方法所报道的血清和血浆样本在检测上的差异。
我们提出该方法是当前RNA提取方案的有力替代方法,可大幅减少miRNA检测所需的样本量,同时提高miRNA检测及可重复性。