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自然种群中性行为的后果:竹节虫的启示。

Consequences of Asexuality in Natural Populations: Insights from Stick Insects.

机构信息

Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland.

Swiss Institute of Bioinformatics, Lausanne, Switzerland.

出版信息

Mol Biol Evol. 2018 Jul 1;35(7):1668-1677. doi: 10.1093/molbev/msy058.

Abstract

Recombination is a fundamental process with significant impacts on genome evolution. Predicted consequences of the loss of recombination include a reduced effectiveness of selection, changes in the amount of neutral polymorphisms segregating in populations, and an arrest of GC-biased gene conversion. Although these consequences are empirically well documented for nonrecombining genome portions, it remains largely unknown if they extend to the whole genome scale in asexual organisms. We identify the consequences of asexuality using de novo transcriptomes of five independently derived, obligately asexual lineages of stick insects, and their sexual sister-species. We find strong evidence for higher rates of deleterious mutation accumulation, lower levels of segregating polymorphisms and arrested GC-biased gene conversion in asexuals as compared with sexuals. Taken together, our study conclusively shows that predicted consequences of genome evolution under asexuality can indeed be found in natural populations.

摘要

重组是一个具有重要意义的基因组进化过程。据预测,失去重组会带来一些后果,包括选择有效性降低、群体中中性多态性分离数量的变化,以及 GC 偏向性基因转换的停止。尽管这些后果在非重组基因组部分已经得到了很好的经验验证,但在无性生物中,它们是否会扩展到整个基因组规模仍然很大程度上未知。我们使用五组独立衍生的、强制性无性的竹节虫谱系及其有性姐妹种的从头转录组来确定无性的后果。与有性生物相比,我们在无性生物中发现了很强的证据,表明有害突变积累的速度更高,分离的多态性水平更低,GC 偏向性基因转换停止。总的来说,我们的研究确凿地表明,在自然种群中确实可以发现无性条件下基因组进化的预测后果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcc6/5995167/d6d6f1e67f50/msy058f1.jpg

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