Suppr超能文献

使用 flySAM 实现 的新一代 CRISPR/Cas9 转录激活

Next-generation CRISPR/Cas9 transcriptional activation in using flySAM.

机构信息

Gene Regulatory Laboratory, School of Medicine, Tsinghua University, 100084 Beijing, China.

Institute for Human Genetics and Department of Neurology, University of California, San Francisco, CA 94143.

出版信息

Proc Natl Acad Sci U S A. 2018 May 1;115(18):4719-4724. doi: 10.1073/pnas.1800677115. Epub 2018 Apr 16.

Abstract

CRISPR/Cas9-based transcriptional activation (CRISPRa) has recently emerged as a powerful and scalable technique for systematic overexpression genetic analysis in We present flySAM, a potent tool for in vivo CRISPRa, which offers major improvements over existing strategies in terms of effectiveness, scalability, and ease of use. flySAM outperforms existing in vivo CRISPRa strategies and approximates phenotypes obtained using traditional Gal4-UAS overexpression. Moreover, because flySAM typically requires only a single sgRNA, it dramatically improves scalability. We use flySAM to demonstrate multiplexed CRISPRa, which has not been previously shown in vivo. In addition, we have simplified the experimental use of flySAM by creating a single vector encoding both the UAS:Cas9-activator and the sgRNA, allowing for inducible CRISPRa in a single genetic cross. flySAM will replace previous CRISPRa strategies as the basis of our growing genome-wide transgenic overexpression resource, TRiP-OE.

摘要

基于 CRISPR/Cas9 的转录激活(CRISPRa)最近成为一种强大且可扩展的技术,可用于系统地上调遗传分析。我们提出了 flySAM,这是一种用于体内 CRISPRa 的有效工具,与现有策略相比,在有效性、可扩展性和易用性方面有了重大改进。flySAM 优于现有的体内 CRISPRa 策略,并接近使用传统 Gal4-UAS 过表达获得的表型。此外,由于 flySAM 通常只需要一个 sgRNA,因此它极大地提高了可扩展性。我们使用 flySAM 来展示以前在体内未显示的多路复用 CRISPRa。此外,我们通过创建一个同时编码 UAS:Cas9-激活子和 sgRNA 的单个载体,简化了 flySAM 的实验使用,从而可以在单个遗传杂交中进行诱导型 CRISPRa。flySAM 将取代以前的 CRISPRa 策略,成为我们不断增长的全基因组转基因过表达资源 TRiP-OE 的基础。

相似文献

1
Next-generation CRISPR/Cas9 transcriptional activation in using flySAM.使用 flySAM 实现 的新一代 CRISPR/Cas9 转录激活
Proc Natl Acad Sci U S A. 2018 May 1;115(18):4719-4724. doi: 10.1073/pnas.1800677115. Epub 2018 Apr 16.
2
Optimized strategy for in vivo Cas9-activation in .优化体内 Cas9 激活策略。
Proc Natl Acad Sci U S A. 2017 Aug 29;114(35):9409-9414. doi: 10.1073/pnas.1707635114. Epub 2017 Aug 14.
4
flySAM Transgenic CRISPRa System Manual.flySAM转基因CRISPRa系统手册。
Bio Protoc. 2019 Jan 20;9(2):e3147. doi: 10.21769/BioProtoc.3147.
5
CRISPR-Based Transcriptional Activation in Drosophila.基于 CRISPR 的 Drosophila 转录激活
Methods Mol Biol. 2022;2540:177-199. doi: 10.1007/978-1-0716-2541-5_8.
7
In Vivo Transcriptional Activation Using CRISPR/Cas9 in Drosophila.利用 CRISPR/Cas9 在果蝇中进行体内转录激活。
Genetics. 2015 Oct;201(2):433-42. doi: 10.1534/genetics.115.181065. Epub 2015 Aug 5.
8
Perspectives on gene expression regulation techniques in Drosophila.果蝇基因表达调控技术的研究进展
J Genet Genomics. 2019 Apr 20;46(4):213-220. doi: 10.1016/j.jgg.2019.03.006. Epub 2019 Apr 17.
9
The New State of the Art: Cas9 for Gene Activation and Repression.最新技术水平:用于基因激活和抑制的Cas9
Mol Cell Biol. 2015 Nov;35(22):3800-9. doi: 10.1128/MCB.00512-15. Epub 2015 Sep 14.

引用本文的文献

4
Optoribogenetic Modulation of Transcription.转录的光遗传调控
Methods Mol Biol. 2025;2840:37-44. doi: 10.1007/978-1-0716-4047-0_3.

本文引用的文献

4
Optimized strategy for in vivo Cas9-activation in .优化体内 Cas9 激活策略。
Proc Natl Acad Sci U S A. 2017 Aug 29;114(35):9409-9414. doi: 10.1073/pnas.1707635114. Epub 2017 Aug 14.
7
Comparison of Cas9 activators in multiple species.多种物种中Cas9激活剂的比较。
Nat Methods. 2016 Jul;13(7):563-567. doi: 10.1038/nmeth.3871. Epub 2016 May 23.
8
In Vivo Transcriptional Activation Using CRISPR/Cas9 in Drosophila.利用 CRISPR/Cas9 在果蝇中进行体内转录激活。
Genetics. 2015 Oct;201(2):433-42. doi: 10.1534/genetics.115.181065. Epub 2015 Aug 5.
9
Highly efficient Cas9-mediated transcriptional programming.高效的Cas9介导的转录编程。
Nat Methods. 2015 Apr;12(4):326-8. doi: 10.1038/nmeth.3312. Epub 2015 Mar 2.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验