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CETSA 的新用途:通过 OGT 对翻译后修饰进行先天免疫受体稳定性的监测。

New use for CETSA: monitoring innate immune receptor stability via post-translational modification by OGT.

机构信息

Department of Chemistry and Biochemistry, University of Delaware, Newark, DE, 19716, USA.

Department of Biological Chemistry, The Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.

出版信息

J Bioenerg Biomembr. 2018 Jun;50(3):231-240. doi: 10.1007/s10863-018-9754-z. Epub 2018 Apr 18.

Abstract

O-GlcNAcylation is a dynamic and functionally diverse post-translational modification shown to affect thousands of proteins, including the innate immune receptor nucleotide-binding oligomerization domain-containing protein 2 (Nod2). Mutations of Nod2 (R702W, G908R and 1007 fs) are associated with Crohn's disease and have lower stabilities compared to wild type. Cycloheximide (CHX)-chase half-life assays have been used to show that O-GlcNAcylation increases the stability and response of both wild type and Crohn's variant Nod2, R702W. A more rapid method to assess stability afforded by post-translational modifications is necessary to fully comprehend the correlation between NLR stability and O-GlcNAcylation. Here, a recently developed cellular thermal shift assay (CETSA) that is typically used to demonstrate protein-ligand binding was adapted to detect shifts in protein stabilization upon increasing O-GlcNAcylation levels in Nod2. This assay was used as a method to predict if other Crohn's associated Nod2 variants were O-GlcNAcylated, and also identified the modification on another NLR, Nod1. Classical immunoprecipitations and NF-κB transcriptional assays were used to confirm the presence and effect of this modification on these proteins. The results presented here demonstrate that CETSA is a convenient method that can be used to detect the stability effect of O-GlcNAcylation on O-GlcNAc-transferase (OGT) client proteins and will be a powerful tool in studying post-translational modification.

摘要

O-糖基化是一种动态的、功能多样的翻译后修饰,据显示它可以影响数千种蛋白质,包括天然免疫受体核苷酸结合寡聚化结构域蛋白 2(Nod2)。Nod2 的突变(R702W、G908R 和 1007fs)与克罗恩病有关,与野生型相比,其稳定性较低。细胞松弛素(CHX)追踪半衰期测定法已被用于表明 O-糖基化可增加野生型和克罗恩病变异型 Nod2、R702W 的稳定性和反应性。需要一种更快速的方法来评估翻译后修饰所赋予的稳定性,以充分理解 NLR 稳定性与 O-糖基化之间的相关性。在这里,我们对最近开发的细胞热转移测定(CETSA)进行了调整,该测定通常用于证明蛋白-配体结合,以检测 Nod2 中 O-糖基化水平增加时蛋白稳定性的变化。该测定方法被用于预测其他与克罗恩病相关的 Nod2 变体是否被 O-糖基化,同时还鉴定了另一个 NLR、Nod1 上的修饰。经典免疫沉淀和 NF-κB 转录测定用于证实这些蛋白中存在这种修饰及其影响。本文的结果表明,CETSA 是一种方便的方法,可用于检测 O-糖基转移酶(OGT)靶蛋白上 O-糖基化对其稳定性的影响,并且将成为研究翻译后修饰的有力工具。

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本文引用的文献

1
Quantitative time-resolved chemoproteomics reveals that stable -GlcNAc regulates box C/D snoRNP biogenesis.
Proc Natl Acad Sci U S A. 2017 Aug 15;114(33):E6749-E6758. doi: 10.1073/pnas.1702688114. Epub 2017 Jul 31.
2
Protein O-GlcNAcylation: emerging mechanisms and functions.
Nat Rev Mol Cell Biol. 2017 Jul;18(7):452-465. doi: 10.1038/nrm.2017.22. Epub 2017 May 10.
3
Deciphering the Functions of Protein O-GlcNAcylation with Chemistry.
ACS Chem Biol. 2017 Feb 17;12(2):326-335. doi: 10.1021/acschembio.6b01065. Epub 2017 Jan 19.
4
Molecular Recognition of Muramyl Dipeptide Occurs in the Leucine-rich Repeat Domain of Nod2.
ACS Infect Dis. 2017 Apr 14;3(4):264-270. doi: 10.1021/acsinfecdis.6b00154. Epub 2016 Oct 31.
5
Hexokinase Is an Innate Immune Receptor for the Detection of Bacterial Peptidoglycan.
Cell. 2016 Jul 28;166(3):624-636. doi: 10.1016/j.cell.2016.05.076. Epub 2016 Jun 30.
6
Crystal structure of NOD2 and its implications in human disease.
Nat Commun. 2016 Jun 10;7:11813. doi: 10.1038/ncomms11813.
7
Identification and biological consequences of the O-GlcNAc modification of the human innate immune receptor, Nod2.
Glycobiology. 2016 Jan;26(1):13-8. doi: 10.1093/glycob/cwv076. Epub 2015 Sep 14.
8
O-GlcNAc occurs cotranslationally to stabilize nascent polypeptide chains.
Nat Chem Biol. 2015 May;11(5):319-25. doi: 10.1038/nchembio.1774. Epub 2015 Mar 16.
9
Tracking cancer drugs in living cells by thermal profiling of the proteome.
Science. 2014 Oct 3;346(6205):1255784. doi: 10.1126/science.1255784. Epub 2014 Oct 2.
10
The cellular thermal shift assay for evaluating drug target interactions in cells.
Nat Protoc. 2014 Sep;9(9):2100-22. doi: 10.1038/nprot.2014.138. Epub 2014 Aug 7.

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