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(林奈,1753年)的基因组结构以及通过分子细胞遗传学揭示的诱导异源四倍体。

The genome structure of (Linnaeus, 1753) and an induced allotetraploid revealed by molecular cytogenetics.

作者信息

do Nascimento Eliza F de M B, Dos Santos Bruna V, Marques Lara O C, Guimarães Patricia M, Brasileiro Ana C M, Leal-Bertioli Soraya C M, Bertioli David J, Araujo Ana C G

机构信息

University of Brasilia, Institute of Biological Sciences, Campus Darcy Ribeiro, CEP 70.910-900, Brasília, DF, Brazil.

Embrapa Genetic Resources and Biotechnology, PqEB W5 Norte Final, CP 02372, CEP 70.770-917, Brasília, DF, Brazil.

出版信息

Comp Cytogenet. 2018 Mar 14;12(1):111-140. doi: 10.3897/CompCytogen.v12i1.20334. eCollection 2018.

Abstract

Peanut, (Linnaeus, 1753) is an allotetraploid cultivated plant with two subgenomes derived from the hybridization between two diploid wild species, (Krapovickas & W. C. Gregory, 1994) and (Krapovickas & W. C. Gregory, 1994), followed by spontaneous chromosomal duplication. To understand genome changes following polyploidy, the chromosomes of , IpaDur1, an induced allotetraploid ( × ) and the diploid progenitor species were cytogenetically compared. The karyotypes of the allotetraploids share the number and general morphology of chromosomes; DAPI bands pattern and number of 5S rDNA loci. However, one 5S rDNA locus presents a heteromorphic FISH signal in both allotetraploids, relative to corresponding progenitor. Whilst for the number of 45S rDNA loci was equivalent to the sum of those present in the diploid species, in IpaDur1, two loci have not been detected. Overall distribution of repetitive DNA sequences was similar in both allotetraploids, although had additional CMA bands and few slight differences in the LTR-retrotransposons distribution compared to IpaDur1. GISH showed that the chromosomes of both allotetraploids had preferential hybridization to their corresponding diploid genomes. Nevertheless, at least one pair of IpaDur1 chromosomes had a clear mosaic hybridization pattern indicating recombination between the subgenomes, clear evidence that the genome of IpaDur1 shows some instability comparing to the genome of that shows no mosaic of subgenomes, although both allotetraploids derive from the same progenitor species. For some reasons, the chromosome structure of is inherently more stable, or, it has been at least, partially stabilized through genetic changes and selection.

摘要

花生(Linnaeus,1753)是一种异源四倍体栽培植物,其两个亚基因组源自两个二倍体野生种之间的杂交(Krapovickas和W. C. Gregory,1994),随后发生自发染色体加倍。为了解多倍体化后的基因组变化,对诱导异源四倍体IpaDur1(×)及其二倍体祖先种的染色体进行了细胞遗传学比较。异源四倍体的核型在染色体数目和总体形态、DAPI带型模式以及5S rDNA位点数量上具有一致性。然而,相对于相应的祖先种,两个异源四倍体中均有一个5S rDNA位点呈现出异形FISH信号。虽然的45S rDNA位点数量与二倍体物种中的位点数量总和相当,但在IpaDur1中未检测到两个位点。两个异源四倍体中重复DNA序列的总体分布相似,尽管与IpaDur1相比,有额外的CMA带且在LTR-反转录转座子分布上有一些细微差异。基因组原位杂交显示,两个异源四倍体的染色体与其相应的二倍体基因组有优先杂交。然而,IpaDur1至少有一对染色体具有明显的嵌合杂交模式,表明亚基因组之间发生了重组,这清楚地证明,与没有亚基因组嵌合现象的相比,IpaDur1的基因组表现出一定的不稳定性,尽管这两个异源四倍体源自同一祖先种。由于某些原因,的染色体结构本质上更稳定,或者至少通过遗传变化和选择部分地实现了稳定。

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