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从一名62岁法国人的粪便中分离出的新物种GD6菌株的基因组序列及描述

Genome sequence and description of strain GD6 sp. nov., isolated from the stool of a 62-year-old Frenchman.

作者信息

Al-Bayssari C, Dubourg G, Cimmino T, Okdah L, Mathlouthi N, Nguyen T T, Andrieu C, Rathored J, Fournier P-E, Raoult D, Rolain J-M

机构信息

Aix-Marseille Université IRD, APHM, MEPHI, IHU Méditerranée Infection, Marseille, France.

出版信息

New Microbes New Infect. 2018 Feb 27;23:77-82. doi: 10.1016/j.nmni.2018.02.010. eCollection 2018 May.

DOI:10.1016/j.nmni.2018.02.010
PMID:29692909
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5913357/
Abstract

strain GD6 (=CSUR P892 = DSMZ 45751) is the new type strain collected from the stool of a 69-year-old Frenchman admitted to an intensive care unit and receiving a 10-day course of imipenem at the time of stool collection. This is a Gram-positive, facultative anaerobic, rod-shaped bacterium. We describe here the features of this organism, together with its complete genome sequence and annotation. The genome size is 6 719 043 bp with 49.6% G+C content and contains 6211 protein-coding and 65 sRNA genes, including four 5S rRNA genes, one 16S rRNA gene and one 23S rRNA gene.

摘要

菌株GD6(=CSUR P892 = DSMZ 45751)是从一名69岁法国男性粪便中分离得到的新型菌株,该患者因入住重症监护病房,在粪便采集时正在接受为期10天的亚胺培南治疗。这是一种革兰氏阳性、兼性厌氧、杆状细菌。我们在此描述该菌株的特征,以及其完整的基因组序列和注释。基因组大小为6719043 bp,G+C含量为49.6%,包含6211个蛋白质编码基因和65个sRNA基因,其中包括4个5S rRNA基因、1个16S rRNA基因和1个23S rRNA基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56bd/5913357/3a9347b3e537/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56bd/5913357/01f833ca12da/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56bd/5913357/0156a4901cec/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56bd/5913357/3a9347b3e537/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56bd/5913357/01f833ca12da/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56bd/5913357/0156a4901cec/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56bd/5913357/3a9347b3e537/gr3.jpg

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