一个用于寄生线虫和吸虫的多组学数据库。
A Multi-Omics Database for Parasitic Nematodes and Trematodes.
作者信息
Martin John, Tyagi Rahul, Rosa Bruce A, Mitreva Makedonka
机构信息
McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO, USA.
Division of Infectious Diseases, Department of Medicine, Washington University School of Medicine, St. Louis, MO, USA.
出版信息
Methods Mol Biol. 2018;1757:371-397. doi: 10.1007/978-1-4939-7737-6_13.
Abstract
Helminth.net ( www.helminth.net ) is a web-based resource that was launched in 2000 as simply " Nematode.net " to host and investigate gene sequences from nematode genomes. Over the years it has evolved to become the moniker for a collection of databases: Nematode.net and Trematode.net . These databases host information for 73 nematode (roundworms) and 17 trematode (flatworms) species and serve as backbone for a number of tools that allow users to query slices of the data for multifactorial combinations of species-omics properties. Recent focus has been on inclusion of gene and protein expression data, population genomics and cross-kingdom interactions (metagenomics datasets). This chapter describes the website, the available tools and some of the new features.
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