Ashraf Simin, Soudi Mohammad Reza, Ghadam Parinaz
Department of Microbiology, Faculty of Biological Sciences, Alzahra University, Tehran, Postal code:1993893973. Iran.
Department of Biotechnology, Faculty of Biological Sciences, Alzahra University, Tehran, Postal code:1993893973 Iran.
Iran J Biotechnol. 2017 Aug 19;15(2):120-127. doi: 10.15171/ijb.1477. eCollection 2017.
A number of microorganisms and their enzymes have been reported as xanthan depolymerizers. species are well-known polysaccharide hydrolyzing bacteria. However, and sp. XD are the only species in the genus which are now known to degrade xanthan. Complete biodegradation of the xanthan exopolysaccharide is a rarely found capability among microorganisms. The aim of this study is to survey xanthanase producing bacteria with an appropriate bioactivity for the biopolymer degradation under different environmental conditions. The bacteria were isolated based on viscosity reduction of the xanthan solution. Bacterial isolates were identified using rep-PCR (repetitive element-based genomic fingerprinting) and 16S rDNA sequencing. Xanthanases were identified using rep-PCR (repetitive element-based genomic fingerprinting) and 16S rDNA sequencing. Xanthanases were characterized by measuring their activity at different temperatures, pH values, and NaCl concentrations. Degradation of other polysaccharides and xanthan degradation products were investigated based on the screening plate method and TLC (thin-layer chromatography), respectively. :Six isolates from different species with a complete xanthan degrading capability were isolated from Urmia Lake. Phylogenetic analysis placed these strains within the genus with the closest relatives that were found to be , and . These isolates displayed different levels of the xanthan biodegradation activity in temperatures ranging from 15 to 55°C and pH values from 4 to 11. Xanthanolytic activity was generally prevented in presence of NaCl (> 0.1 mol.L-1). Furthermore, the isolated spp. could degrade several other polysaccharides including xylan, CMC (carboxymethyl cellulose), starch, alginate, and pectin. Novel strains of the six different species that were introduced in the present study are able to produce xanthanases with interesting characteristics. In light of the results from this study, special applications, particularly in healthcare, medicine, and the environment is hereby proposed for these enzymes.
已有多种微生物及其酶被报道可作为黄原胶解聚酶。某些物种是著名的多糖水解细菌。然而,[具体物种1]和[具体物种2] XD是该属中目前已知能降解黄原胶的仅有的两个物种。黄原胶胞外多糖的完全生物降解在微生物中是一种罕见的能力。本研究的目的是在不同环境条件下,筛选具有适当生物活性以降解这种生物聚合物的产黄原胶酶细菌。这些细菌是根据黄原胶溶液粘度的降低来分离的。利用基于重复元件的基因组指纹分析(rep-PCR)和16S rDNA测序对细菌分离株进行鉴定。利用基于重复元件的基因组指纹分析(rep-PCR)和16S rDNA测序对黄原胶酶进行鉴定。通过在不同温度、pH值和NaCl浓度下测量其活性来对黄原胶酶进行表征。分别基于筛选平板法和薄层色谱法(TLC)研究了其他多糖的降解和黄原胶降解产物。从乌尔米耶湖分离出了六种具有完全黄原胶降解能力的不同[具体物种]分离株。系统发育分析将这些菌株置于[具体属名]属内,发现其最亲近的亲缘关系为[具体亲缘物种1]、[具体亲缘物种2]和[具体亲缘物种3]。这些分离株在15至55°C的温度范围和4至11的pH值下表现出不同水平的黄原胶生物降解活性。在NaCl存在(>0.1 mol.L-1)时,黄原胶分解活性通常受到抑制。此外,分离出的[具体物种] spp. 能够降解包括木聚糖、羧甲基纤维素(CMC)、淀粉、藻酸盐和果胶在内的几种其他多糖。本研究中引入的六种不同[具体物种]的新菌株能够产生具有有趣特性的黄原胶酶。根据本研究结果,特此提出这些酶在特殊应用中的用途,特别是在医疗保健、医学和环境方面。