Suppr超能文献

人胃癌中环状RNA表达谱的基因芯片分析

Gene microarray analysis of the circular RNAs expression profile in human gastric cancer.

作者信息

Shen Yonghua, Zhang Juanjuan, Fu Ziyi, Zhang Bin, Chen Min, Ling Xiufeng, Zou Xiaoping

机构信息

Department of Gastroenterology, The Affiliated Drum Tower Hospital of Nanjing University, Medical School, Nanjing, Jiangsu 210008, P.R. China.

Department of Reproduction, Affiliated Nanjing Maternal and Child Health Hospital, Nanjing Medical University, Nanjing, Jiangsu 210004, P.R. China.

出版信息

Oncol Lett. 2018 Jun;15(6):9965-9972. doi: 10.3892/ol.2018.8590. Epub 2018 Apr 26.

Abstract

Human gastric cancer is a common malignant neoplasm of the digestive system and represents a threat to human health worldwide. The mechanisms underlying gastric cancer germination and development are not yet fully understood. Circular RNAs (circRNAs) serve crucial roles in various physiological and pathological processes, particularly cancer. However, few studies have focused on the mechanisms involving circRNAs in gastric cancer. Therefore the present study set out to identify the differentially expressed circRNAs in gastric cancer. Three specimens of gastric cancer and normal gastric tissue were selected and circRNA microarray analysis was performed to detect the differentially expressed circRNAs. The changes in circRNAs were confirmed by reverse transcription-quantitative polymerase chain reaction analysis. A total of 347 upregulated and 603 downregulated circRNAs (fold-change, >2.0) were identified in gastric cancer compared with the normal gastric tissue. A total of 20 selected circRNAs were dysregulated during gastric cancer, which suggests their potential role in gastric cancer. The present study identified circRNAs in the expression profile of human gastric cancer that were potentially involved in the underlying molecular mechanisms of its development.

摘要

人类胃癌是消化系统常见的恶性肿瘤,对全球人类健康构成威胁。胃癌发生和发展的潜在机制尚未完全明确。环状RNA(circRNA)在各种生理和病理过程,尤其是癌症中发挥着关键作用。然而,很少有研究关注circRNA在胃癌中的作用机制。因此,本研究旨在鉴定胃癌中差异表达的circRNA。选取了3例胃癌组织和正常胃组织标本,进行circRNA微阵列分析以检测差异表达的circRNA。通过逆转录-定量聚合酶链反应分析证实了circRNA的变化。与正常胃组织相比,在胃癌中总共鉴定出347个上调的circRNA和603个下调的circRNA(变化倍数>2.0)。共有20个选定的circRNA在胃癌中表达失调,这表明它们在胃癌中具有潜在作用。本研究在人类胃癌表达谱中鉴定出了可能参与其发展潜在分子机制的circRNA。

相似文献

1
Gene microarray analysis of the circular RNAs expression profile in human gastric cancer.
Oncol Lett. 2018 Jun;15(6):9965-9972. doi: 10.3892/ol.2018.8590. Epub 2018 Apr 26.
2
Microarray Expression Profile and Functional Analysis of Circular RNAs in Osteosarcoma.
Cell Physiol Biochem. 2017;43(3):969-985. doi: 10.1159/000481650. Epub 2017 Sep 29.
4
Microarray and bioinformatics analysis of circular RNAs expression profile in traumatic lung injury.
Exp Ther Med. 2020 Jul;20(1):227-234. doi: 10.3892/etm.2020.8686. Epub 2020 Apr 23.
5
Circular RNA and gene expression profiles in gastric cancer based on microarray chip technology.
Oncol Rep. 2017 Mar;37(3):1804-1814. doi: 10.3892/or.2017.5415. Epub 2017 Feb 1.
6
Expression profile of circular RNAs in human gastric cancer tissues.
Mol Med Rep. 2017 Sep;16(3):2469-2476. doi: 10.3892/mmr.2017.6916. Epub 2017 Jul 4.
9
Screening for Differentially Expressed Circular RNAs in the Cartilage of Osteoarthritis Patients for Their Diagnostic Value.
Genet Test Mol Biomarkers. 2019 Oct;23(10):706-716. doi: 10.1089/gtmb.2019.0108. Epub 2019 Sep 9.

引用本文的文献

1
Functions of circular RNAs and their potential applications in gastric cancer (Review).
Oncol Lett. 2023 Apr 12;25(6):217. doi: 10.3892/ol.2023.13803. eCollection 2023 Jun.
3
The circular RNA hsa_circ_000780 as a potential molecular diagnostic target for gastric cancer.
BMC Med Genomics. 2021 Nov 27;14(1):282. doi: 10.1186/s12920-021-01096-6.
4
Hsa_circ_0076305 induces migration-proliferation dichotomy in gastric cancer.
Oncol Lett. 2021 Mar;21(3):220. doi: 10.3892/ol.2021.12481. Epub 2021 Jan 21.
5
Identification of novel biomarkers, MUC5AC, MUC1, KRT7, GAPDH, CD44 for gastric cancer.
Med Oncol. 2020 Mar 27;37(5):34. doi: 10.1007/s12032-020-01362-0.
7
Circular RNAs and gastrointestinal cancers: Epigenetic regulators with a prognostic and therapeutic role.
Crit Rev Oncol Hematol. 2020 Jan;145:102854. doi: 10.1016/j.critrevonc.2019.102854. Epub 2019 Dec 20.
8
Circular RNAs: from biogenesis and function to diseases.
Chin Med J (Engl). 2019 Oct 20;132(20):2457-2464. doi: 10.1097/CM9.0000000000000465.
9
circZNF609 promotes the proliferation and migration of gastric cancer by sponging miR-483-3p and regulating CDK6.
Onco Targets Ther. 2019 Oct 4;12:8197-8205. doi: 10.2147/OTT.S193031. eCollection 2019.
10
Functional Site Discovery From Incomplete Training Data: A Case Study With Nucleic Acid-Binding Proteins.
Front Genet. 2019 Aug 30;10:729. doi: 10.3389/fgene.2019.00729. eCollection 2019.

本文引用的文献

1
Circular RNAs expression profiles in human gastric cancer.
Sci Rep. 2017 Aug 22;7(1):9060. doi: 10.1038/s41598-017-09076-6.
2
Global circular RNA expression profile of human gastric cancer and its clinical significance.
Cancer Med. 2017 Jun;6(6):1173-1180. doi: 10.1002/cam4.1055. Epub 2017 May 23.
4
Circular RNA and gene expression profiles in gastric cancer based on microarray chip technology.
Oncol Rep. 2017 Mar;37(3):1804-1814. doi: 10.3892/or.2017.5415. Epub 2017 Feb 1.
5
Microarray Expression Profile of Circular RNAs in Heart Tissue of Mice with Myocardial Infarction-Induced Heart Failure.
Cell Physiol Biochem. 2016;39(1):205-16. doi: 10.1159/000445617. Epub 2016 Jun 24.
6
miARma-Seq: a comprehensive tool for miRNA, mRNA and circRNA analysis.
Sci Rep. 2016 May 11;6:25749. doi: 10.1038/srep25749.
8
Genetics and Molecular Pathogenesis of Gastric Adenocarcinoma.
Gastroenterology. 2015 Oct;149(5):1153-1162.e3. doi: 10.1053/j.gastro.2015.05.059. Epub 2015 Jun 12.
9
Circular RNA ITCH has inhibitory effect on ESCC by suppressing the Wnt/β-catenin pathway.
Oncotarget. 2015 Mar 20;6(8):6001-13. doi: 10.18632/oncotarget.3469.
10

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验