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混沌同步和 Nelder-Mead 搜索在非线性药理学系统中的参数估计:在免疫治疗模型中估计肿瘤抗原性。

Chaos synchronization and Nelder-Mead search for parameter estimation in nonlinear pharmacological systems: Estimating tumor antigenicity in a model of immunotherapy.

机构信息

University at Buffalo, State University of New York, USA.

Université de Montréal, Canada.

出版信息

Prog Biophys Mol Biol. 2018 Nov;139:23-30. doi: 10.1016/j.pbiomolbio.2018.06.006. Epub 2018 Jun 19.

Abstract

In mathematical pharmacology, models are constructed to confer a robust method for optimizing treatment. The predictive capability of pharmacological models depends heavily on the ability to track the system and to accurately determine parameters with reference to the sensitivity in projected outcomes. To closely track chaotic systems, one may choose to apply chaos synchronization. An advantageous byproduct of this methodology is the ability to quantify model parameters. In this paper, we illustrate the use of chaos synchronization combined with Nelder-Mead search to estimate parameters of the well-known Kirschner-Panetta model of IL-2 immunotherapy from noisy data. Chaos synchronization with Nelder-Mead search is shown to provide more accurate and reliable estimates than Nelder-Mead search based on an extended least squares (ELS) objective function. Our results underline the strength of this approach to parameter estimation and provide a broader framework of parameter identification for nonlinear models in pharmacology.

摘要

在数学药理学中,建立模型是为了提供一种优化治疗的稳健方法。药理学模型的预测能力在很大程度上取决于跟踪系统的能力,并能够准确确定与预期结果灵敏度相关的参数。为了紧密跟踪混沌系统,可以选择应用混沌同步。这种方法的一个有利的副产品是能够量化模型参数。在本文中,我们展示了如何将混沌同步与 Nelder-Mead 搜索相结合,从噪声数据中估计著名的 IL-2 免疫治疗 Kirschner-Panetta 模型的参数。与基于扩展最小二乘(ELS)目标函数的 Nelder-Mead 搜索相比,混沌同步与 Nelder-Mead 搜索相结合可以提供更准确和可靠的估计。我们的结果强调了这种参数估计方法的优势,并为药理学中的非线性模型提供了更广泛的参数识别框架。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c4d7/6263737/dc2b5d9d9e9c/nihms-977476-f0001.jpg

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本文引用的文献

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Using white noise to enhance synchronization of coupled chaotic systems.
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