Aznan Afiah Nasuha, Abdul Karim Norwahidah, Wan Ngah Wan Zurinah, Jubri Zakiah
Department of Biochemistry, National University of Malaysia Medical Centre, Kuala Lumpur 56000, Malaysia.
Oncol Lett. 2018 Jul;16(1):73-82. doi: 10.3892/ol.2018.8650. Epub 2018 May 7.
Optimization of critical factors affects transduction efficiency and is able to reduce reagent consumption. The present study aimed to determine the optimum transduction conditions of small hairpin (sh)RNA against peroxiredoxin 4 (PRDX4) in the HepG2 cell line. Cell viability assays were conducted based on serum condition, incubation time, polybrene concentration and antibiotic dose selection. Non-targeting control shRNA was transduced into HepG2 cells in a 5-fold serial dilution, and colonies positive for green fluorescent protein were counted using ImageJ software. Reverse transcription-quantitative polymerase chain reaction and western blot analysis were performed to validate PRDX4 expression. The optimum cell density for transduction was 5.0×10 cells/well in 96-well plates to achieve 40 to 50% confluency the following day. The transduction media consisted of 10% fetal bovine serum (FBS) and 12 µg/ml polybrene, and was used to dilute lentiviral particles at a functional titer of 4.9×10 TU/ml for multiplicity of infection (MOI) of 20, 15 and 10, for 24 h of incubation. Selection with 7 µg/ml puromycin was performed in transduced cells. shRNA 3 was revealed to inhibit PRDX4 mRNA and protein expression. In conclusion, PRDX4 was successfully silenced in 5.0×10 HepG2 cells cultured with 10% FBS and 12 µg/ml polybrene, at a 4.9×10 TU/ml functional titer for MOI of 20, 15 and 10.
关键因素的优化会影响转导效率,并能够减少试剂消耗。本研究旨在确定针对HepG2细胞系中过氧化物还原酶4(PRDX4)的小发夹(sh)RNA的最佳转导条件。基于血清条件、孵育时间、聚凝胺浓度和抗生素剂量选择进行细胞活力测定。将非靶向对照shRNA以5倍系列稀释的方式转导到HepG2细胞中,并使用ImageJ软件对绿色荧光蛋白阳性的菌落进行计数。进行逆转录-定量聚合酶链反应和蛋白质印迹分析以验证PRDX4的表达。转导的最佳细胞密度为96孔板中每孔5.0×10个细胞,以便在第二天达到40%至50%的汇合度。转导培养基由10%胎牛血清(FBS)和12μg/ml聚凝胺组成,用于将慢病毒颗粒稀释至功能滴度为4.9×10 TU/ml,用于感染复数(MOI)为20、15和10,孵育24小时。在转导的细胞中用7μg/ml嘌呤霉素进行筛选。结果显示shRNA 3可抑制PRDX4的mRNA和蛋白质表达。总之,在含有10% FBS和12μg/ml聚凝胺的培养基中培养的5.0×10个HepG2细胞中,以4.9×10 TU/ml的功能滴度成功沉默了PRDX4,MOI分别为20、15和10。