• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

卤代烷酸脱卤酶家族成员α-磷酸葡萄糖变位酶的底物识别与催化机制

Mechanism of Substrate Recognition and Catalysis of the Haloalkanoic Acid Dehalogenase Family Member α-Phosphoglucomutase.

作者信息

Zhang Chunchun, Allen Karen N, Dunaway-Mariano Debra

机构信息

Testing & Analytical Center , Sichuan University , Chengdu , Sichuan 610064 , People's Republic of China.

Department of Chemistry , Boston University , Boston , Massachusetts 02215-2521 , United States.

出版信息

Biochemistry. 2018 Jul 31;57(30):4504-4517. doi: 10.1021/acs.biochem.8b00396. Epub 2018 Jul 13.

DOI:10.1021/acs.biochem.8b00396
PMID:29952545
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10725300/
Abstract

α-Phosphoglucomutase (αPGM), in its phosphorylated state, catalyzes the interconversion of α-d-glucose 1-phosphate and α-d-glucose 6-phosphate. The αPGM of Lactococcus lactis is a type C2B member of the haloalkanoic acid dehalogenase (HAD) enzyme family and is comprised of a Rossmann-fold catalytic domain and inserted α/β-fold cap domain. The active site is formed at the domain-domain interface. Herein, we report the results from a kinetic-based study of L. lactis αPGM catalysis, which demonstrate enzyme activation by autocatalyzed phosphorylation of Asp8 with αG1P, the intermediacy of αG1,6bisP in the phospho Ll-αPGM-catalyzed conversion of αG1P to G6P, and the reorientation of the αG1,6bisP intermediate via dissociation to solvent and rebinding. In order to provide insight into the structural determinants of L. lactis αPGM substrate recognition and catalysis, metal cofactor and substrate specificities were determined as were the contributions made by active-site residues toward catalytic efficiency. Lastly, the structure and catalytic mechanism of L. lactis αPGM are compared with those of HAD family phosphomutases L. lactis β-phosphoglucomutase and eukayotic α-phosphomannomutase to provide insight into the evolution of phosphohexomutases from HAD family phosphatases.

摘要

α-磷酸葡萄糖变位酶(αPGM)在其磷酸化状态下催化α-D-葡萄糖1-磷酸和α-D-葡萄糖6-磷酸的相互转化。乳酸乳球菌的αPGM是卤代烷酸脱卤酶(HAD)酶家族的C2B型成员,由一个罗斯曼折叠催化结构域和插入的α/β折叠帽结构域组成。活性位点在结构域-结构域界面处形成。在此,我们报告了基于动力学的乳酸乳球菌αPGM催化研究结果,这些结果表明通过αG1P对Asp8的自催化磷酸化实现酶激活,αG1,6-双磷酸在磷酸化的乳酸乳球菌αPGM催化的αG1P向G6P转化过程中的中间体作用,以及αG1,6-双磷酸中间体通过解离到溶剂中并重新结合而发生的重新定向。为了深入了解乳酸乳球菌αPGM底物识别和催化的结构决定因素,确定了金属辅因子和底物特异性以及活性位点残基对催化效率的贡献。最后,将乳酸乳球菌αPGM的结构和催化机制与HAD家族磷酸变位酶乳酸乳球菌β-磷酸葡萄糖变位酶和真核生物α-磷酸甘露糖变位酶的结构和催化机制进行比较,以深入了解磷酸己糖变位酶从HAD家族磷酸酶的进化过程。

相似文献

1
Mechanism of Substrate Recognition and Catalysis of the Haloalkanoic Acid Dehalogenase Family Member α-Phosphoglucomutase.卤代烷酸脱卤酶家族成员α-磷酸葡萄糖变位酶的底物识别与催化机制
Biochemistry. 2018 Jul 31;57(30):4504-4517. doi: 10.1021/acs.biochem.8b00396. Epub 2018 Jul 13.
2
Catalytic cycling in beta-phosphoglucomutase: a kinetic and structural analysis.β-磷酸葡萄糖变位酶中的催化循环:动力学与结构分析
Biochemistry. 2005 Jul 12;44(27):9404-16. doi: 10.1021/bi050558p.
3
Analysis of the structural determinants underlying discrimination between substrate and solvent in beta-phosphoglucomutase catalysis.β-磷酸葡萄糖变位酶催化作用中底物与溶剂区分的结构决定因素分析
Biochemistry. 2009 Mar 10;48(9):1984-95. doi: 10.1021/bi801653r.
4
Caught in the act: the structure of phosphorylated beta-phosphoglucomutase from Lactococcus lactis.当场捕获:乳酸乳球菌磷酸化β-磷酸葡萄糖变位酶的结构
Biochemistry. 2002 Jul 2;41(26):8351-9. doi: 10.1021/bi0202373.
5
Conformational cycling in beta-phosphoglucomutase catalysis: reorientation of the beta-D-glucose 1,6-(Bis)phosphate intermediate.β-磷酸葡萄糖变位酶催化中的构象循环:β-D-葡萄糖1,6-(双)磷酸中间体的重新定向。
Biochemistry. 2006 Jun 27;45(25):7818-24. doi: 10.1021/bi060136v.
6
The pentacovalent phosphorus intermediate of a phosphoryl transfer reaction.磷酰基转移反应的五价磷中间体。
Science. 2003 Mar 28;299(5615):2067-71. doi: 10.1126/science.1082710. Epub 2003 Mar 13.
7
α-Fluorophosphonates reveal how a phosphomutase conserves transition state conformation over hexose recognition in its two-step reaction.α-氟膦酸酯揭示了磷酸变位酶在其两步反应中,如何在己糖识别过程中保持过渡态构象。
Proc Natl Acad Sci U S A. 2014 Aug 26;111(34):12384-9. doi: 10.1073/pnas.1402850111. Epub 2014 Aug 7.
8
High-resolution structure of an atypical α-phosphoglucomutase related to eukaryotic phosphomannomutases.与真核磷酸甘露糖变位酶相关的非典型α-磷酸葡萄糖变位酶的高分辨率结构
Acta Crystallogr D Biol Crystallogr. 2013 Oct;69(Pt 10):2008-16. doi: 10.1107/S0907444913017046. Epub 2013 Sep 20.
9
The reaction of phosphohexomutase from Pseudomonas aeruginosa: structural insights into a simple processive enzyme.铜绿假单胞菌磷酸己糖变位酶的反应:对一种简单的持续性酶的结构见解。
J Biol Chem. 2006 Jun 2;281(22):15564-71. doi: 10.1074/jbc.M600590200. Epub 2006 Apr 4.
10
Chemical confirmation of a pentavalent phosphorane in complex with beta-phosphoglucomutase.与β-磷酸葡萄糖变位酶复合的五价磷烷的化学确证。
J Am Chem Soc. 2005 Apr 20;127(15):5298-9. doi: 10.1021/ja0509073.

引用本文的文献

1
Glycine-Induced Phosphorylation Plays a Pivotal Role in Energy Metabolism in Roots and Amino Acid Metabolism in Leaves of Tea Plant.甘氨酸诱导的磷酸化在茶树根系能量代谢和叶片氨基酸代谢中起关键作用。
Foods. 2023 Jan 10;12(2):334. doi: 10.3390/foods12020334.
2
Mini Review: Advances in 2-Haloacid Dehalogenases.迷你综述:2-卤代酸脱卤酶的研究进展
Front Microbiol. 2021 Oct 15;12:758886. doi: 10.3389/fmicb.2021.758886. eCollection 2021.
3
Cellular Mn/Zn Ratio Influences Phosphoglucomutase Activity and Capsule Production in Streptococcus pneumoniae D39.细胞内 Mn/Zn 比值影响肺炎链球菌 D39 的磷酸葡萄糖变位酶活性和荚膜生成。
J Bacteriol. 2021 Jun 8;203(13):e0060220. doi: 10.1128/JB.00602-20.
4
Allomorphy as a mechanism of post-translational control of enzyme activity.同形现象作为一种酶活性的翻译后调控机制。
Nat Commun. 2020 Nov 2;11(1):5538. doi: 10.1038/s41467-020-19215-9.
5
Two forms of phosphomannomutase in gammaproteobacteria: The overlooked membrane-bound form of AlgC is required for twitching motility of Lysobacter enzymogenes.γ-变形菌中有两种磷酸甘露糖变位酶:AlgC 这种被忽视的膜结合形式是 Lysobacter enzymogenes 滚动运动所必需的。
Environ Microbiol. 2019 Nov;21(11):3969-3978. doi: 10.1111/1462-2920.14615. Epub 2019 May 23.

本文引用的文献

1
Zinc in Cellular Regulation: The Nature and Significance of "Zinc Signals".锌在细胞调控中的作用:“锌信号”的本质和意义。
Int J Mol Sci. 2017 Oct 31;18(11):2285. doi: 10.3390/ijms18112285.
2
Multiple Ligand-Bound States of a Phosphohexomutase Revealed by Principal Component Analysis of NMR Peak Shifts.主成分分析 NMR 峰位移揭示磷酸己糖变位酶的多种配体结合态
Sci Rep. 2017 Jul 13;7(1):5343. doi: 10.1038/s41598-017-05557-w.
3
Biology, Mechanism, and Structure of Enzymes in the α-d-Phosphohexomutase Superfamily.α-D-磷酸己糖变位酶超家族中酶的生物学、作用机制及结构
Adv Protein Chem Struct Biol. 2017;109:265-304. doi: 10.1016/bs.apcsb.2017.04.005. Epub 2017 May 17.
4
Mutations in hereditary phosphoglucomutase 1 deficiency map to key regions of enzyme structure and function.遗传性磷酸葡萄糖变位酶1缺乏症中的突变定位于酶结构和功能的关键区域。
J Inherit Metab Dis. 2015 Mar;38(2):243-56. doi: 10.1007/s10545-014-9757-9. Epub 2014 Aug 29.
5
High-resolution structure of an atypical α-phosphoglucomutase related to eukaryotic phosphomannomutases.与真核磷酸甘露糖变位酶相关的非典型α-磷酸葡萄糖变位酶的高分辨率结构
Acta Crystallogr D Biol Crystallogr. 2013 Oct;69(Pt 10):2008-16. doi: 10.1107/S0907444913017046. Epub 2013 Sep 20.
6
Role of α-phosphoglucomutase and phosphoglucose isomerase activities at the branching point between sugar catabolism and anabolism in Lactobacillus casei.在干酪乳杆菌糖分解代谢和合成代谢分支点处,α-磷酸葡萄糖变位酶和磷酸葡萄糖异构酶活性的作用。
J Appl Microbiol. 2011 Aug;111(2):433-42. doi: 10.1111/j.1365-2672.2011.05045.x. Epub 2011 May 24.
7
Analysis of the structural determinants underlying discrimination between substrate and solvent in beta-phosphoglucomutase catalysis.β-磷酸葡萄糖变位酶催化作用中底物与溶剂区分的结构决定因素分析
Biochemistry. 2009 Mar 10;48(9):1984-95. doi: 10.1021/bi801653r.
8
Molecular identification of mammalian phosphopentomutase and glucose-1,6-bisphosphate synthase, two members of the alpha-D-phosphohexomutase family.α-D-磷酸己糖变位酶家族的两个成员——哺乳动物磷酸戊糖变位酶和葡萄糖-1,6-二磷酸合酶的分子鉴定
J Biol Chem. 2007 Nov 2;282(44):31844-51. doi: 10.1074/jbc.M706818200. Epub 2007 Sep 5.
9
Effect of carboxylate-binding mode on metal binding/selectivity and function in proteins.羧酸盐结合模式对蛋白质中金属结合/选择性及功能的影响。
Acc Chem Res. 2007 Jan;40(1):85-93. doi: 10.1021/ar068181i.
10
The alpha-phosphoglucomutase of Lactococcus lactis is unrelated to the alpha-D-phosphohexomutase superfamily and is encoded by the essential gene pgmH.乳酸乳球菌的α-磷酸葡萄糖变位酶与α-D-磷酸己糖变位酶超家族无关,由必需基因pgmH编码。
J Biol Chem. 2006 Dec 1;281(48):36864-73. doi: 10.1074/jbc.M607044200. Epub 2006 Sep 15.