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来自阿根廷一个培养物保藏中心的季也蒙假丝酵母菌和法塔假丝酵母菌临床分离株的重新鉴定及抗真菌药敏谱

Reidentification and antifungal susceptibility profile of Candida guilliermondii and Candida famata clinical isolates from a culture collection in Argentina.

作者信息

Taverna Constanza Giselle, Córdoba Susana, Vivot Matías, Szusz Wanda, Vivot Walter, Bosco-Borgeat María Eugenia, Davel Graciela

机构信息

Departamento Micología, Instituto Nacional de Enfermedades Infecciosas "Dr. Carlos G. Malbrán," Ciudad Autónoma de Buenos Aires, Argentina.

出版信息

Med Mycol. 2019 Apr 1;57(3):314-323. doi: 10.1093/mmy/myy038.

Abstract

The aim of this work was to reidentify strains previously identified as Candida guilliermondii and Candida famata by conventional phenotypic methods conserved in a culture collection from Argentina using ribosomal DNA sequencing, ACT1 gene sequencing, and matrix-assisted laser desorption ionization - time of flight mass spectrometry (MALDI-TOF MS). In addition, we performed antifungal susceptibility tests of eight antifungal drugs commonly used in clinical treatment. We identified 68 isolates belonging to the Candida guilliermondii species complex (59 C. guilliermondii, 8 C. fermentati, and 1 Candida carpophila), 16 isolates belonging to the Candida famata species complex (8 C. famata, 6 Debaryomyces nepalensis, 1 Debaryomyces fabryi, and 1 Debaryomyces tyrocola). Although sequencing of ITS region was able to identify C. guilliermondii and D. nepalensis isolates, sequencing of ACT1 gene seems to be the most appropriate technique for differentiation between C. fermentati and C. carpophila and between members of the C. famata species complex others than D. nepalensis. MALDI-TOF MS has a good potential for the identification of these yeasts, particularly in clinical laboratories since is a rapid and easy to perform technique. Here, we report the first isolation of D. tyrocola from a human patient and the first isolation of D. nepalensis from lungs and blood of human patients. Finally, correct identification and determination of antifungal susceptibility of those closely related species could be a useful tool for clinicians to choose the most effective antifungal treatment.

摘要

这项工作的目的是通过核糖体DNA测序、ACT1基因测序以及基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS),对阿根廷一个菌种保藏中心采用传统表型方法鉴定为季也蒙念珠菌和法塔念珠菌的菌株进行重新鉴定。此外,我们还对临床治疗中常用的8种抗真菌药物进行了药敏试验。我们鉴定出68株属于季也蒙念珠菌复合种(59株季也蒙念珠菌、8株发酵念珠菌和1株嗜鱼念珠菌),16株属于法塔念珠菌复合种(8株法塔念珠菌、6株尼泊尔德巴利酵母、1株法布里德巴利酵母和1株酪酒德巴利酵母)。虽然ITS区域测序能够鉴定季也蒙念珠菌和尼泊尔德巴利酵母分离株,但ACT1基因测序似乎是区分发酵念珠菌和嗜鱼念珠菌以及区分尼泊尔德巴利酵母以外法塔念珠菌复合种成员的最合适技术。MALDI-TOF MS在鉴定这些酵母菌方面具有很大潜力,特别是在临床实验室,因为它是一种快速且易于操作的技术。在此,我们报告了首次从人类患者中分离出酪酒德巴利酵母以及首次从人类患者的肺部和血液中分离出尼泊尔德巴利酵母。最后,正确鉴定和确定这些密切相关菌种的药敏情况可能是临床医生选择最有效抗真菌治疗方法的有用工具。

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