Kim Si Hyun, Shin Jeong Hwan, Mok Jeong Ha, Kim Shine Young, Song Sae Am, Kim Hye Ran, Kook Joong-Ki, Chang Young-Hyo, Bae Il Kwon, Lee Kwangha
Department of Laboratory Medicine, Inje University College of Medicine, Busan 614-735, Republic of Korea ; Paik Institute for Clinical Research, Inje University College of Medicine, Busan 614-735, Republic of Korea.
Department of Internal Medicine, Pusan National University School of Medicine, Busan 602-739, Republic of Korea ; Biomedical Research Institute, Pusan National University School of Medicine, Busan 602-739, Republic of Korea.
Biomed Res Int. 2014;2014:250408. doi: 10.1155/2014/250408. Epub 2014 May 29.
Introduction. The aim of this study was to differentiate between Candida famata and Candida guilliermondii correctly by using matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) and gene sequencing. Methods. Twenty-eight Candida strains from blood cultures that had been identified as C. famata (N = 25), C. famata/C. guilliermondii (N = 2), and C. guilliermondii (N = 1) by the VITEK 2 system using the YST ID card were included. We identified these strains by MALDI-TOF MS and gene sequencing using the 28S rRNA and ITS genes and compared the results with those obtained by the VITEK 2 system. Results. All 28 isolates were finally identified as C. guilliermondii. Sequencing analysis of the 28S rRNA gene showed 99.80%-100% similarity with C. guilliermondii for all 28 strains. The ITS gene sequencing of the strains showed 98.34%-100% homology with C. guilliermondii. By MALDI-TOF, we could correctly identify 21 (75%) of 28 C. guilliermondii isolates. Conclusion. We should suspect misidentification when C. famata is reported by the VITEK 2 system, and we always should keep in mind the possibility of misidentification of any organism when an uncommon species is reported.
引言。本研究的目的是通过基质辅助激光解吸/电离飞行时间质谱(MALDI-TOF MS)和基因测序来正确区分法塔假丝酵母和季也蒙假丝酵母。方法。纳入了28株从血培养中分离出的假丝酵母菌株,这些菌株通过VITEK 2系统使用YST鉴定卡被鉴定为法塔假丝酵母(N = 25)、法塔假丝酵母/季也蒙假丝酵母(N = 2)和季也蒙假丝酵母(N = 1)。我们通过MALDI-TOF MS和使用28S rRNA和ITS基因的基因测序对这些菌株进行鉴定,并将结果与VITEK 2系统获得的结果进行比较。结果。所有28株分离株最终均被鉴定为季也蒙假丝酵母。28S rRNA基因的测序分析显示,所有28株菌株与季也蒙假丝酵母的相似度为99.80% - 100%。这些菌株的ITS基因测序显示与季也蒙假丝酵母的同源性为98.34% - 100%。通过MALDI-TOF,我们能够正确鉴定28株季也蒙假丝酵母分离株中的21株(75%)。结论。当VITEK 2系统报告法塔假丝酵母时,我们应怀疑鉴定错误,并且当报告不常见物种时,我们始终应牢记任何生物体存在鉴定错误的可能性。