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lncRNAs和mRNAs差异表达谱的综合分析揭示弥漫性大B细胞淋巴瘤转化中的ceRNA网络。

Comprehensive analysis of differentially expressed profiles of lncRNAs and mRNAs reveals ceRNA networks in the transformation of diffuse large B-cell lymphoma.

作者信息

Tian Lu, He Yangyan, Zhang Hongkun, Wu Ziheng, Li Donglin, Zheng Chengfei

机构信息

Department of Vascular Surgery, The First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, Zhejiang 310006, P.R. China.

出版信息

Oncol Lett. 2018 Jul;16(1):882-890. doi: 10.3892/ol.2018.8722. Epub 2018 May 16.

DOI:10.3892/ol.2018.8722
PMID:29963159
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6019896/
Abstract

Diffuse large B-cell lymphoma (DLBCL) is one of the malignancies with a high mortality rate. The molecular mechanisms involved in transformation of DLBCL remain unclear. Therefore, it is critically important to investigate the biological mechanisms of DLBCL. Accumulating evidence indicates that long non-coding RNAs (lncRNAs) serve key functions in tumorigenesis, cancer progression and metastasis. Compared with follicular lymphoma (FL), a total of 123 upregulated lncRNAs and 192 downregulated lncRNAs in DLBCL were identified. Subsequently, a specific DLBCL-associated competing endogenous RNA (ceRNA) network and a specific FL-associated ceRNA network was constructed. Gene Oncology and Kyoto Encyclopedia of Genes and Genomes pathway analysis revealed that differentially expressed lncRNAs served key functions in regulating signal transduction, transcription, cell adhesion, development and protein amino acid phosphorylation. Furthermore, the molecular functions of PRKCQ antisense RNA 1, HLA complex P5, OIP5 antisense RNA 1, growth arrest specific 5 and taurine upregulated 1 were investigated, and it was revealed that these lncRNAs served important functions in regulating a series of biological processes, including anti-apoptosis, cell cycle, DNA repair, response to oxidative stress and transcription. The present study may provide a potential novel therapeutic and prognostic target for the treatment of DLBCL.

摘要

弥漫性大B细胞淋巴瘤(DLBCL)是死亡率较高的恶性肿瘤之一。DLBCL转化所涉及的分子机制仍不清楚。因此,研究DLBCL的生物学机制至关重要。越来越多的证据表明,长链非编码RNA(lncRNA)在肿瘤发生、癌症进展和转移中发挥关键作用。与滤泡性淋巴瘤(FL)相比,在DLBCL中总共鉴定出123个上调的lncRNA和192个下调的lncRNA。随后,构建了一个特定的DLBCL相关竞争性内源RNA(ceRNA)网络和一个特定的FL相关ceRNA网络。基因本体论和京都基因与基因组百科全书通路分析表明,差异表达的lncRNA在调节信号转导、转录、细胞黏附、发育和蛋白质氨基酸磷酸化中发挥关键作用。此外,还研究了蛋白激酶Cθ反义RNA 1、HLA复合体P5、OIP5反义RNA 1、生长停滞特异性蛋白5和牛磺酸上调基因1的分子功能,结果表明这些lncRNA在调节一系列生物学过程中发挥重要作用,包括抗凋亡、细胞周期、DNA修复、对氧化应激的反应和转录。本研究可能为DLBCL的治疗提供一个潜在的新型治疗和预后靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2b0/6019896/726378f055d1/ol-16-01-0882-g05.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2b0/6019896/c851f628f048/ol-16-01-0882-g00.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2b0/6019896/ac7002b5be92/ol-16-01-0882-g02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2b0/6019896/34cef8e9c087/ol-16-01-0882-g03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2b0/6019896/93111bdd07f6/ol-16-01-0882-g04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2b0/6019896/726378f055d1/ol-16-01-0882-g05.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2b0/6019896/c851f628f048/ol-16-01-0882-g00.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2b0/6019896/5577f1ebd603/ol-16-01-0882-g01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2b0/6019896/ac7002b5be92/ol-16-01-0882-g02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2b0/6019896/34cef8e9c087/ol-16-01-0882-g03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2b0/6019896/93111bdd07f6/ol-16-01-0882-g04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2b0/6019896/726378f055d1/ol-16-01-0882-g05.jpg

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