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Pm61:利用比较基因组学分析鉴定的小麦地方品种徐宿 3 号抗白粉病的隐性基因。

Pm61: a recessive gene for resistance to powdery mildew in wheat landrace Xuxusanyuehuang identified by comparative genomics analysis.

机构信息

The National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.

College of Life and Environmental Science, Minzu University of China, Beijing, 100081, China.

出版信息

Theor Appl Genet. 2018 Oct;131(10):2085-2097. doi: 10.1007/s00122-018-3135-1. Epub 2018 Jul 2.

Abstract

A single recessive powdery mildew resistance gene Pm61 from wheat landrace Xuxusanyuehuang was mapped within a 0.46-cM genetic interval spanning a 1.3-Mb interval of the genomic region of chromosome arm 4AL. Epidemics of powdery mildew incited by the biotrophic fungus Blumeria graminis f. sp. tritici (Bgt) have caused significant yield reductions in many wheat (Triticum aestivum)-producing regions. Identification of powdery mildew resistance genes is required for sustainable improvement of wheat for disease resistance. Chinese wheat landrace Xuxusanyuehuang was resistant to several Bgt isolates at the seedling stage. Genetic analysis based on the inoculation of Bgt isolate E09 on the F, F, and F populations produced by crossing Xuxusanyuehuang to susceptible cultivar Mingxian 169 revealed that the resistance of Xuxusanyuehuang was controlled by a single recessive gene. Bulked segregant analysis and simple sequence repeat (SSR) mapping placed the gene on chromosome bin 4AL-4-0.80-1.00. Comparative genomics analysis was performed to detect the collinear genomic regions of Brachypodium distachyon, rice, sorghum, Aegilops tauschii, T. urartu, and T. turgidum ssp. dicoccoides. Based on the use of 454 contig sequences and the International Wheat Genome Sequence Consortium survey sequence of Chinese Spring wheat, four EST-SSR and seven SSR markers were linked to the gene. An F recombinant inbred line population derived from Xuxusanyuehuang × Mingxian 169 cross was used to develop the genetic linkage map. The gene was localized in a 0.46-cM genetic interval between Xgwm160 and Xicsx79 corresponding to 1.3-Mb interval of the genomic region in wheat genome. This is a new locus for powdery mildew resistance on chromosome arm 4AL and is designated Pm61.

摘要

一个来自小麦地方品种徐秀三越黄的隐性单基因抗白粉病基因 Pm61,被定位在小麦 4AL 染色体臂的一个 1.3Mb 基因组区域内,遗传区间为 0.46cM。由专性寄生菌禾谷布氏白粉菌(Blumeria graminis f. sp. tritici,Bgt)引起的白粉病流行,在许多小麦(Triticum aestivum)种植区造成了显著的产量损失。为了实现小麦对病害的可持续改良,需要鉴定抗白粉病基因。中国小麦地方品种徐秀三越黄在苗期对几种 Bgt 分离株表现出抗性。基于将徐秀三越黄与感病品种明贤 169 杂交产生的 F1、F2 和 F3 群体接种 Bgt 分离株 E09 的遗传分析表明,徐秀三越黄的抗性由一个单隐性基因控制。利用分离池分析法和简单序列重复(SSR)作图将该基因定位在 4AL-4-0.80-1.00 染色体 bin 上。比较基因组学分析用于检测拟南芥、水稻、高粱、节节麦、粗山羊草和野生二粒小麦的共线性基因组区域。基于使用 454 个 contig 序列和国际小麦基因组序列联盟对中国春小麦的调查序列,将四个 EST-SSR 和七个 SSR 标记与该基因连锁。利用徐秀三越黄×明贤 169 杂交衍生的 F 重组自交系群体,开发了遗传连锁图谱。该基因位于 Xgwm160 和 Xicsx79 之间的 0.46cM 遗传区间,对应于小麦基因组中该 1.3Mb 基因组区域。这是 4AL 染色体臂上一个新的白粉病抗性基因位点,被命名为 Pm61。

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