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烟草和水稻中复制因子C复合物之间的亚基相互作用差异

Subunit Interaction Differences Between the Replication Factor C Complexes in and Rice.

作者信息

Chen Yueyue, Qian Jie, You Li, Zhang Xiufeng, Jiao Jinxia, Liu Yang, Zhao Jie

机构信息

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.

出版信息

Front Plant Sci. 2018 Jun 19;9:779. doi: 10.3389/fpls.2018.00779. eCollection 2018.

DOI:10.3389/fpls.2018.00779
PMID:29971074
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6018503/
Abstract

Replication factor C (RFC) is a multisubunit complex that opens the sliding clamp and loads it onto the DNA chain in an ATP-dependent manner and is thus critical for high-speed DNA synthesis. In yeast () and humans, biochemical studies and structural analysis revealed interaction patterns between the subunits and architectures of the clamp loaders. Mutations of lead to loss of cell viability and defective replication. However, the functions of RFC subunits in higher plants are unclear, except for , and the interaction and arrangement of the subunits have not been studied. Here, we identified /+, /+, and /+ mutants in , and found that embryos and endosperm arrested at the 2/4-celled embryo proper stage and 6-8 nuclei stages, respectively. Subcellular localization analysis revealed that AtRFC1 and OsRFC1/4/5 proteins were localized in the nucleus, while AtRFC2/3/4/5 and OsRFC2/3 proteins were present both in the nucleus and cytoplasm. By using yeast two-hybrid (Y2H) and bimolecular fluorescence complementation (BiFC) techniques, we demonstrated the interactions of and rice () RFC subunits, and proposed arrangements of the five subunits within the RFC complex, which were AtRFC5-AtRFC4-AtRFC3/2-AtRFC2/3-AtRFC1 and OsRFC5-OsRFC2-OsRFC3-OsRFC4-OsRFC1, respectively. In addition, AtRFC1 could interact with AtRFC2/3/4/5 in the presence of other subunits, while OsRFC1 directly interacted with the other four subunits. To further characterize the regions required for complex formation, truncated RFC proteins of the subunits were created. The results showed that C-termini of the RFC subunits are required for complex formation. Our studies indicate that the localization and interactions of RFCs in and rice are distinctly discrepant.

摘要

复制因子C(RFC)是一种多亚基复合体,它能打开滑动夹并以ATP依赖的方式将其加载到DNA链上,因此对高速DNA合成至关重要。在酵母()和人类中,生化研究和结构分析揭示了亚基之间的相互作用模式以及夹加载器的结构。的突变导致细胞活力丧失和复制缺陷。然而,除了之外,RFC亚基在高等植物中的功能尚不清楚,并且亚基之间的相互作用和排列尚未得到研究。在这里,我们在中鉴定出 /+、 /+ 和 /+ 突变体,发现胚胎和胚乳分别在2/4细胞期的胚体阶段和6 - 8核阶段停滞。亚细胞定位分析表明,AtRFC1和OsRFC1/4/5蛋白定位于细胞核,而AtRFC2/3/4/5和OsRFC2/3蛋白在细胞核和细胞质中均有存在。通过使用酵母双杂交(Y2H)和双分子荧光互补(BiFC)技术,我们证明了和水稻()RFC亚基之间的相互作用,并提出了RFC复合体中五个亚基的排列方式,分别为AtRFC5 - AtRFC4 - AtRFC3/2 - AtRFC2/3 - AtRFC1和OsRFC5 - OsRFC2 - OsRFC3 - OsRFC4 - OsRFC1。此外,在其他亚基存在的情况下,AtRFC1可以与AtRFC2/3/4/5相互作用,而OsRFC1直接与其他四个亚基相互作用。为了进一步表征复合体形成所需的区域,构建了亚基的截短RFC蛋白。结果表明,RFC亚基的C末端是复合体形成所必需的。我们的研究表明,RFC在和水稻中的定位和相互作用明显不同。

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本文引用的文献

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2
Non-SMC elements 1 and 3 are required for early embryo and seedling development in Arabidopsis.非SMC元件1和3是拟南芥早期胚胎和幼苗发育所必需的。
J Exp Bot. 2017 Feb 1;68(5):1039-1054. doi: 10.1093/jxb/erx016.
3
Control of Genome Integrity by RFC Complexes; Conductors of PCNA Loading onto and Unloading from Chromatin during DNA Replication.
一个 RFC4 中的单一氨基酸取代导致内复制和对 DNA 损伤的抗性受损。
Genes (Basel). 2022 Jun 9;13(6):1037. doi: 10.3390/genes13061037.
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Comparative proteome analyses of rhizomania resistant transgenic sugar beets based on RNA silencing mechanism.基于 RNA 沉默机制的抗马铃薯卷叶病毒转基因甜菜比较蛋白质组分析。
GM Crops Food. 2021 Jan 2;12(1):419-433. doi: 10.1080/21645698.2021.1954467. Epub 2021 Sep 8.
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Genome-wide identification of the restorer-of-fertility-like (RFL) gene family in Brassica napus and expression analysis in Shaan2A cytoplasmic male sterility.甘蓝型油菜中育性恢复类(RFL)基因家族的全基因组鉴定及陕2A细胞质雄性不育中的表达分析
BMC Genomics. 2020 Nov 4;21(1):765. doi: 10.1186/s12864-020-07163-z.
6
Interactional similarities and differences in the protein complex of PCNA and DNA replication factor C between rice and Arabidopsis.在水稻和拟南芥的 PCNA 和 DNA 复制因子 C 的蛋白质复合物中相互作用的相似性和差异性。
BMC Plant Biol. 2019 Jun 14;19(1):257. doi: 10.1186/s12870-019-1874-z.
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Genes (Basel). 2017 Jan 26;8(2):52. doi: 10.3390/genes8020052.
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Arabidopsis PCNAs form complexes with selected D-type cyclins.拟南芥增殖细胞核抗原(PCNA)与特定的D型细胞周期蛋白形成复合物。
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