Suppr超能文献

中国齐河547株伪狂犬病病毒的遗传特征及突变分析

Genetic characterization and mutation analysis of Qihe547 Aujeszky's disease virus in China.

作者信息

Liu Cun, Liu Yanhan, Tian Ye, Wei Xuehua, Zhang Yue, Tian Fulin

机构信息

Shandong Provincial Center for Animal Disease Control and Prevention, Ji'nan, 250022, Shandong, China.

College of Veterinary Medicine, China Agricultural University, Beijing, 100193, China.

出版信息

BMC Vet Res. 2018 Jul 6;14(1):218. doi: 10.1186/s12917-018-1492-2.

Abstract

BACKGROUND

Aujeszky's disease virus (ADV) can cause neurologic disease in young pigs, respiratory disease in older pigs and abortion or birth of mummified fetuses or stillborn neonates. The re-emergence of Aujeszky's disease (AD) in pig farms vaccinated with live vaccine (Bartha-K61) caused substantial economic losses to Chinese pig industry since late 2011. A field ADV, named Qihe547, was isolated from pigs that exhibited suspected AD clinical symptoms. To better understand the genetic characteristics and mutations of Qihe547 ADV, the whole genome was sequenced and analyzed.

RESULTS

The genomic length of Qihe547 ADV was 143,404 bp, with 73.59% G + C contents. Phylogenetic analysis based on the whole genome of ADV strains revealed that Chinese ADV strains were located to one group with three subgroups. Qihe547 ADV was closely related to these novel ADV strains isolated in China since 2012. Qihe547 presented numerous hypervariable regions compared with oversea ADV strains. In 34 genes of Qihe547 ADV, amino acid (AA) insertion or deletion were observed. In addition, numerous AA mutations were found in the main protective antigen genes (gB, gC and gD genes). The differences of potential antigenic peptides in the main protective antigens between Qihe547 ADV and ADV Bartha were discovered in the dominant antigenic regions of gB (AA59-AA126, AA507-AA734),the extracellular region of gC and gD.

CONCLUSION

High diversity was observed between Qihe547 and foreign ADV isolates. The AA variations and the differences of potential antigenic peptides in the important functional regions of the main protective antigen (gB, gC and gD) of ADV Qihe547 may contribute to immune evasion of the virus and may be partial reason that the virus escapes from the vaccination of Bartha-K61 vaccine. In a word, the effect of the variations obviously requires further research.

摘要

背景

伪狂犬病病毒(ADV)可导致仔猪神经疾病、成年猪呼吸道疾病以及流产、产出木乃伊胎或死产仔猪。自2011年末以来,接种活疫苗(Bartha-K61)的猪场中伪狂犬病(AD)的再度出现给中国养猪业造成了巨大经济损失。从表现出疑似AD临床症状的猪中分离出一株野毒株ADV,命名为齐河547。为更好地了解齐河547 ADV的遗传特征和突变情况,对其全基因组进行了测序和分析。

结果

齐河547 ADV基因组长度为143,404 bp,G+C含量为73.59%。基于ADV毒株全基因组的系统发育分析表明,中国ADV毒株位于一个组内,分为三个亚组。齐河547 ADV与2012年以来在中国分离的这些新型ADV毒株密切相关。与国外ADV毒株相比,齐河547存在大量高变区。在齐河547 ADV的34个基因中,观察到氨基酸(AA)插入或缺失。此外,在主要保护性抗原基因(gB、gC和gD基因)中发现了大量AA突变。在gB的显性抗原区(AA59-AA126、AA507-AA734)、gC的胞外区和gD中发现了齐河547 ADV与Bartha ADV主要保护性抗原中潜在抗原肽的差异。

结论

齐河547与国外ADV分离株之间存在高度多样性。齐河547 ADV主要保护性抗原(gB、gC和gD)重要功能区的AA变异以及潜在抗原肽的差异可能有助于病毒免疫逃逸,可能是该病毒逃避Bartha-K61疫苗免疫的部分原因。总之,这些变异的影响显然需要进一步研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4349/6035464/55ad4e3322b4/12917_2018_1492_Fig1_HTML.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验