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一个 microRNA 特征和 TGF-β1 反应被鉴定为航天反应的关键主调控因子。

A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response.

机构信息

WYLE, NASA Ames Research Center, Moffett Field, California, United States of America.

USRA, NASA Ames Research Center, Moffett Field, California, United States of America.

出版信息

PLoS One. 2018 Jul 25;13(7):e0199621. doi: 10.1371/journal.pone.0199621. eCollection 2018.

Abstract

Translating fundamental biological discoveries from NASA Space Biology program into health risk from space flights has been an ongoing challenge. We propose to use NASA GeneLab database to gain new knowledge on potential systemic responses to space. Unbiased systems biology analysis of transcriptomic data from seven different rodent datasets reveals for the first time the existence of potential "master regulators" coordinating a systemic response to microgravity and/or space radiation with TGF-β1 being the most common regulator. We hypothesized the space environment leads to the release of biomolecules circulating inside the blood stream. Through datamining we identified 13 candidate microRNAs (miRNA) which are common in all studies and directly interact with TGF-β1 that can be potential circulating factors impacting space biology. This study exemplifies the utility of the GeneLab data repository to aid in the process of performing novel hypothesis-based research.

摘要

将美国国家航空航天局(NASA)太空生物学计划中的基础生物学发现转化为太空飞行的健康风险一直是一个持续的挑战。我们建议使用 NASA GeneLab 数据库来获得关于太空潜在全身反应的新知识。对来自七个不同啮齿动物数据集的转录组数据进行无偏系统生物学分析,首次揭示了潜在的“主调控因子”的存在,这些调控因子协调了对微重力和/或空间辐射的全身反应,其中 TGF-β1 是最常见的调节因子。我们假设太空环境导致在血流中循环的生物分子的释放。通过数据挖掘,我们确定了 13 个候选 microRNA(miRNA),它们在所有研究中都很常见,并且直接与 TGF-β1 相互作用,它们可能是影响太空生物学的潜在循环因子。本研究例证了 GeneLab 数据存储库在基于假设的新研究过程中的效用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbc7/6059388/ffd5c80ccd20/pone.0199621.g001.jpg

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