Beheshti Afshin, Shirazi-Fard Yasaman, Choi Sungshin, Berrios Daniel, Gebre Samrawit G, Galazka Jonathan M, Costes Sylvain V
WYLE Labs, Space Biosciences Division, NASA Ames Research Center;
Space Biosciences Division, NASA Ames Research Center.
J Vis Exp. 2019 Jan 13(143). doi: 10.3791/58447.
Performing biological experiments in space requires special accommodations and procedures to ensure that these investigations are performed effectively and efficiently. Moreover, given the infrequency of these experiments it is imperative that their impacts be maximized. The rapid advancement of omics technologies offers an opportunity to dramatically increase the volume of data produced from precious spaceflight specimens. To capitalize on this, NASA has developed the GeneLab platform to provide unrestricted access to spaceflight omics data and encourage its widespread analysis. Rodents (both rats and mice) are common model organisms used by scientists to investigate space-related biological impacts. The enclosure that house rodents during spaceflight are called Rodent Habitats (formerly Animal Enclosure Modules), and are substantially different from standard vivarium cages in their dimensions, air flow, and access to water and food. In addition, due to environmental and atmospheric conditions on the International Space Station (ISS), animals are exposed to a higher CO2 concentration. We recently reported that mice in the Rodent Habitats experience large changes in their transcriptome irrespective of whether animals were on the ground or in space. Furthermore, these changes were consistent with a hypoxic response, potentially driven by higher CO2 concentrations. Here we describe how a typical rodent experiment is performed in space, how omics data from these experiments can be accessed through the GeneLab platform, and how to identify key factors in this data. Using this process, any individual can make critical discoveries that could change the design of future space missions and activities.
在太空进行生物学实验需要特殊的设施和程序,以确保这些研究能够高效且有效地进行。此外,鉴于这些实验的频率较低,必须将其影响最大化。组学技术的迅速发展提供了一个机会,可大幅增加从珍贵的太空飞行样本中产生的数据量。为利用这一点,美国国家航空航天局(NASA)开发了基因实验室平台,以提供对太空飞行组学数据的无限制访问,并鼓励对其进行广泛分析。啮齿动物(大鼠和小鼠)是科学家用于研究与太空相关生物影响的常见模式生物。在太空飞行期间饲养啮齿动物的 enclosure 被称为啮齿动物栖息地(以前称为动物饲养舱),其尺寸、气流以及获取水和食物的方式与标准的动物饲养笼有很大不同。此外,由于国际空间站(ISS)上的环境和大气条件,动物会暴露于更高的二氧化碳浓度下。我们最近报告称,无论动物是在地面还是在太空,啮齿动物栖息地中的小鼠其转录组都会发生巨大变化。此外,这些变化与低氧反应一致,可能是由更高的二氧化碳浓度驱动的。在这里,我们描述了在太空进行典型啮齿动物实验的方式、如何通过基因实验室平台获取这些实验的组学数据,以及如何识别该数据中的关键因素。通过这个过程,任何人都可以做出关键发现,从而可能改变未来太空任务和活动的设计。