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膜厚度依赖型 MscL 门控的生物物理机制:全原子分子动力学研究。

Biophysical Mechanisms of Membrane-Thickness-Dependent MscL Gating: An All-Atom Molecular Dynamics Study.

出版信息

Langmuir. 2019 Jun 11;35(23):7432-7442. doi: 10.1021/acs.langmuir.8b02074. Epub 2018 Aug 30.

DOI:10.1021/acs.langmuir.8b02074
PMID:30113845
Abstract

The bacterial mechanosensitive channel, MscL, is activated by membrane tension, acting as a safety valve to prevent cell lysis against hypotonic challenge. It has been established that its activation threshold decreases with membrane thickness, while the underlying mechanism remains to be solved. We performed all-atom molecular dynamics (MD) simulations for the initial opening process of MscL embedded in four different types of lipid bilayers with different thicknesses: 1,2-dilauroyl- sn-glycero-3-phosphocholine (DLPC)), 1,2-dimyristoyl-glycero-3-phosphorylcholine (DMPC), 1,2-dipalmitoyl- sn-glycero-3-phosphocholine (DPPC), and 1,2-distearoyl- sn-glycero-3-phosphocholine (DSPC). In response to membrane stretching, channel opening occurred only in the thinner membranes (DLPC and DMPC) in a thickness-dependent way. We found that the MscL opening was governed by the rate and degree of membrane thinning and that the channel opening was tightly associated with the tilting of transmembrane (TM) helices of MscL toward the membrane plane. Upon membrane stretching, the order parameter of acyl chains of thinner membranes (DLPC and DMPC) became smaller, whereas other thicker membranes (DPPC and DSPC) showed interdigitation with little changes in the order parameter. The decreased order parameter contributed much more to membrane thinning than did interdigitation. We conclude that the membrane-thickness-dependent MscL opening mainly arises from structural changes in MscL to match the altered membrane thickness by stretching.

摘要

细菌机械敏感通道 MscL 可被膜张力激活,充当防止细胞在渗透冲击下裂解的安全阀。现已证实,其激活阈值随膜厚度降低,而其潜在机制尚待解决。我们针对不同厚度的四种不同类型脂质双层(1,2-二软脂酰基-sn-甘油-3-磷酸胆碱(DLPC)、1,2-二肉豆蔻酰基-sn-甘油-3-磷酸胆碱(DMPC)、1,2-二月桂酰基-sn-甘油-3-磷酸胆碱(DPPC)和 1,2-二硬脂酰基-sn-甘油-3-磷酸胆碱(DSPC))中的 MscL 初始开启过程进行了全原子分子动力学(MD)模拟。在膜拉伸的作用下,只有在厚度依赖性的更薄的膜(DLPC 和 DMPC)中通道才会开启。我们发现,MscL 的开启由膜变薄的速度和程度控制,且通道开启与 MscL 的跨膜(TM)螺旋向膜平面倾斜紧密相关。在膜拉伸过程中,较薄的膜(DLPC 和 DMPC)的酰基链序参数变小,而其他较厚的膜(DPPC 和 DSPC)与膜发生互插,其序参数几乎没有变化。较小的序参数对膜变薄的贡献比互插更大。我们的结论是,MscL 的膜厚度依赖性开启主要源于 MscL 的结构变化,以适应膜拉伸引起的膜厚度改变。

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