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遗传变异 rs755622 以性别特异性方式调节多发性硬化严重程度修饰剂 D-多巴色素互变异构酶的表达。

Genetic Variant rs755622 Regulates Expression of the Multiple Sclerosis Severity Modifier D-Dopachrome Tautomerase in a Sex-Specific Way.

机构信息

Innovative Drug Research and Bioinformatics Group, School of Pharmaceutical Sciences, Chongqing University, Chongqing, 401331, China.

Institute of Fungus Resources, College of Life Sciences, Guizhou University, Guiyang, 550025, China.

出版信息

Biomed Res Int. 2018 Jul 24;2018:8285653. doi: 10.1155/2018/8285653. eCollection 2018.

Abstract

Multiple sclerosis (MS) is a sex-specific autoimmune disease involving central nervous system. Previous studies determined that macrophage migration inhibitory factor (MIF) and its homologue D-dopachrome tautomerase (DDT) sex-specifically affect MS progression. Moreover, other studies reported that rs755622 polymorphism in promoter region of gene is associated with risk of MS and affects the promoter activity to regulate expression in a sex-specific way. Given that and share a part of promoter sequence, we surmise that rs755622 can also regulate expression in a sex-specific way. However, this has not yet been studied. Here, we used five large-scale expression quantitative trait loci (eQTLs) and two RNA-seq datasets from brain and blood to assess the potential influence of rs755622 variant on expression of in different genders by the linear regression and differential expression analysis. The results show that the minor allele frequency of rs755622 and expression of are significantly increased in males for MS subjects and this minor allele variant can significantly upregulate expression for males but not females, which suggests that the regulation of expression level by rs755622 can affect MS progression in males. These findings further support and expand conclusions of previous studies and may help to better understand the mechanisms of MS.

摘要

多发性硬化症(MS)是一种涉及中枢神经系统的性别特异性自身免疫性疾病。先前的研究确定,巨噬细胞移动抑制因子(MIF)及其同系物 D-多巴色素互变异构酶(DDT)特异性地影响 MS 的进展。此外,其他研究报告称,基因启动子区域的 rs755622 多态性与 MS 的风险相关,并以性别特异性的方式影响启动子活性来调节的表达。鉴于和共享启动子序列的一部分,我们推测 rs755622 也可以以性别特异性的方式调节的表达。然而,这尚未得到研究。在这里,我们使用了来自大脑和血液的五个大规模表达数量性状基因座(eQTL)和两个 RNA-seq 数据集,通过线性回归和差异表达分析来评估 rs755622 变体对不同性别中表达的潜在影响。结果表明,MS 患者中 rs755622 的次要等位基因频率和的表达在男性中显著增加,而这种次要等位基因变体可以显著上调男性而不是女性的表达,这表明 rs755622 对表达水平的调节可以影响男性 MS 的进展。这些发现进一步支持和扩展了先前研究的结论,并可能有助于更好地理解 MS 的机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/356a/6081589/b2ed83850ef7/BMRI2018-8285653.001.jpg

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