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马铃薯中家族基因的鉴定与表征揭示了它们参与细胞命运决定的肽信号传导以及生物/非生物胁迫反应。

Identification and Characterization of Family Genes in Potato Reveal Their Involvement in Peptide Signaling of Cell Fate Decisions and Biotic/Abiotic Stress Responses.

作者信息

Li Xiaoxu, Salman Ahmad, Guo Cun, Yu Jing, Cao Songxiao, Gao Xiaoming, Li Wei, Li Hong, Guo Yongfeng

机构信息

Key Laboratory for Tobacco Gene Resources, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao 266101, China.

出版信息

Cells. 2018 Aug 27;7(9):120. doi: 10.3390/cells7090120.

Abstract

Leucine-rich repeat receptor-like kinases (LRR-RLKs) represent the largest subfamily of receptor-like kinases (RLKs) and play important roles in regulating growth, development, and stress responses in plants. In this study, 246 genes were identified in the potato () genome, which were further classified into 14 subfamilies. Gene structure analysis revealed that genes within the same subgroup shared similar exon/intron structures. A signature small peptide recognition motif (RxR) was found to be largely conserved within members of subfamily IX, suggesting that these members may recognize peptide signals as ligands. 26 of the 246 genes were found to have arisen from tandem or segmental duplication events. Expression profiling revealed that genes were differentially expressed in various organs/tissues, and several genes were found to be responsive to different stress treatments. Furthermore, StLRR-RLK117 was found to be able to form homodimers and heterodimers with StLRR-RLK042 and StLRR-RLK052. Notably, the overlapping expression region of with () suggested that the feedback loop may be conserved in potato to maintain stem cell homeostasis within the shoot apical meristem.

摘要

富含亮氨酸重复序列的类受体激酶(LRR-RLKs)是类受体激酶(RLKs)中最大的亚家族,在调节植物的生长、发育和应激反应中发挥着重要作用。在本研究中,在马铃薯()基因组中鉴定出246个基因,这些基因进一步被分为14个亚家族。基因结构分析表明,同一亚组内的基因具有相似的外显子/内含子结构。发现一个标志性的小肽识别基序(RxR)在第九亚家族成员中基本保守,这表明这些成员可能识别肽信号作为配体。246个基因中有26个被发现来自串联或片段重复事件。表达谱分析表明,基因在各种器官/组织中差异表达,并且发现几个基因对不同的应激处理有反应。此外,发现StLRR-RLK117能够与StLRR-RLK042和StLRR-RLK052形成同二聚体和异二聚体。值得注意的是,与()重叠的表达区域表明反馈环在马铃薯中可能是保守的,以维持茎尖分生组织内的干细胞稳态。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1390/6162732/d631f2834b1d/cells-07-00120-g001.jpg

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