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基于蒙特卡罗模型的改进 z 分辨率的生物序列块面扫描电子显微镜。

Biological serial block face scanning electron microscopy at improved z-resolution based on Monte Carlo model.

机构信息

National Institute of Biomedical Imaging and Bioengineering, NIH, Bethesda, MD, 20892, USA.

Gatan, Inc., 5794W. Las Positas Blvd, Pleasanton, CA, 94588, USA.

出版信息

Sci Rep. 2018 Aug 28;8(1):12985. doi: 10.1038/s41598-018-31231-w.

DOI:10.1038/s41598-018-31231-w
PMID:30154532
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6113311/
Abstract

Serial block-face electron microscopy (SBEM) provides nanoscale 3D ultrastructure of embedded and stained cells and tissues in volumes of up to 10 µm. In SBEM, electrons with 1-3 keV energies are incident on a specimen block, from which backscattered electron (BSE) images are collected with x, y resolution of 5-10 nm in the block-face plane, and successive layers are removed by an in situ ultramicrotome. Spatial resolution along the z-direction, however, is limited to around 25 nm by the minimum cutting thickness. To improve the z-resolution, we have extracted depth information from BSE images acquired at dual primary beam energies, using Monte Carlo simulations of electron scattering. The relationship between depth of stain and ratio of dual-energy BSE intensities enables us to determine 3D structure with a ×2 improvement in z-resolution. We demonstrate the technique by sub-slice imaging of hepatocyte membranes in liver tissue.

摘要

连续块面电子显微镜(SBEM)可提供嵌入和染色的细胞和组织的纳米级 3D 超微结构,体积可达 10μm。在 SBEM 中,能量为 1-3keV 的电子入射到标本块上,从块表面以 x、y 方向 5-10nm 的分辨率收集背散射电子(BSE)图像,然后通过原位超微切片机去除连续的层。然而,沿 z 方向的空间分辨率由于最小切割厚度的限制,约为 25nm。为了提高 z 分辨率,我们从在双束流能量下获取的 BSE 图像中提取深度信息,使用电子散射的蒙特卡罗模拟。染色深度和双能 BSE 强度比之间的关系使我们能够以 z 分辨率提高 2 倍的方式确定 3D 结构。我们通过对肝组织中肝细胞膜的亚切片成像来演示该技术。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fad6/6113311/15a693a3b132/41598_2018_31231_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fad6/6113311/87dfe2b7235b/41598_2018_31231_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fad6/6113311/96947c43f719/41598_2018_31231_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fad6/6113311/c644bfc411b0/41598_2018_31231_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fad6/6113311/26a4ae069db6/41598_2018_31231_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fad6/6113311/241fe4965e43/41598_2018_31231_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fad6/6113311/15a693a3b132/41598_2018_31231_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fad6/6113311/87dfe2b7235b/41598_2018_31231_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fad6/6113311/96947c43f719/41598_2018_31231_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fad6/6113311/c644bfc411b0/41598_2018_31231_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fad6/6113311/26a4ae069db6/41598_2018_31231_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fad6/6113311/241fe4965e43/41598_2018_31231_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fad6/6113311/15a693a3b132/41598_2018_31231_Fig6_HTML.jpg

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