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一项针对挪威-瑞典冷血快步马赛马成绩的全基因组关联研究揭示了与学习和能量代谢相关的基因。

A genome-wide association study for harness racing success in the Norwegian-Swedish coldblooded trotter reveals genes for learning and energy metabolism.

作者信息

Velie Brandon D, Fegraeus Kim Jäderkvist, Solé Marina, Rosengren Maria K, Røed Knut H, Ihler Carl-Fredrik, Strand Eric, Lindgren Gabriella

机构信息

Department of Animal Breeding & Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.

Department of Basic Sciences and Aquatic Medicine, Norwegian University of Life Sciences, Oslo, Norway.

出版信息

BMC Genet. 2018 Aug 29;19(1):80. doi: 10.1186/s12863-018-0670-3.

Abstract

BACKGROUND

Although harness racing is of high economic importance to the global equine industry, significant genomic resources have yet to be applied to mapping harness racing success. To identify genomic regions associated with harness racing success, the current study performs genome-wide association analyses with three racing performance traits in the Norwegian-Swedish Coldblooded Trotter using the 670 K Axiom Equine Genotyping Array.

RESULTS

Following quality control, 613 horses and 359,635 SNPs were retained for further analysis. After strict Bonferroni correction, nine genome-wide significant SNPs were identified for career earnings. No genome-wide significant SNPs were identified for number of gallops or best km time. However, four suggestive genome-wide significant SNPs were identified for number of gallops, while 19 were identified for best km time. Multiple genes related to intelligence, energy metabolism, and immune function were identified as potential candidate genes for harness racing success.

CONCLUSIONS

Apart from the physiological requirements needed for a harness racing horse to be successful, the results of the current study also advocate learning ability and memory as important elements for harness racing success. Further exploration into the mental capacity required for a horse to achieve racing success is likely warranted.

摘要

背景

尽管轻驾车赛马对全球马产业具有高度的经济重要性,但尚未有大量基因组资源应用于轻驾车赛马成功因素的定位研究。为了确定与轻驾车赛马成功相关的基因组区域,本研究使用670K Axiom马基因分型芯片,对挪威-瑞典冷血快步马的三个比赛成绩性状进行全基因组关联分析。

结果

经过质量控制后,保留了613匹马和359,635个单核苷酸多态性(SNP)用于进一步分析。经过严格的Bonferroni校正后,鉴定出9个与职业生涯收入相关的全基因组显著SNP。未鉴定出与疾驰次数或最佳千米用时相关的全基因组显著SNP。然而,鉴定出4个与疾驰次数相关的全基因组暗示性显著SNP,以及19个与最佳千米用时相关的全基因组暗示性显著SNP。多个与智力、能量代谢和免疫功能相关的基因被确定为轻驾车赛马成功的潜在候选基因。

结论

除了轻驾车赛马成功所需的生理条件外,本研究结果还表明学习能力和记忆力是轻驾车赛马成功的重要因素。有必要进一步探索马匹在比赛中取得成功所需的心理能力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e9f/6114527/d5aec23f04d3/12863_2018_670_Fig1_HTML.jpg

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