Garcia-Ruiz Eva, Auxillos Jamie, Li Tianyi, Dai Junbiao, Cai Yizhi
Manchester Institute of Biotechnology (MIB), School of Chemistry, The University of Manchester, Manchester, United Kingdom.
Centre for Synthetic Genomics, Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China.
Methods Enzymol. 2018;608:277-306. doi: 10.1016/bs.mie.2018.05.003. Epub 2018 Jul 6.
For many years, researchers have devised elegant techniques to assemble genetic parts into larger constructs. Recently, increasing needs for complex DNA constructs has driven countless attempts to optimize DNA assembly methods for improved efficiency, fidelity, and modularity. These efforts have resulted in simple, robust, standardized, and fast protocols that enable the implementation of high-throughput DNA assembly projects for the fabrication of large synthetic genetic constructs. Recently our groups have developed the YeastFab assembly, a highly efficient method for the design and construction of DNA-building blocks based on the native elements from Saccharomyces cerevisiae. Furthermore, these standardized DNA parts can be readily characterized and assembled into transcriptional units and pathways. In this chapter, we describe the protocols to assemble pathways from characterized standardized yeast parts using YeastFab.
多年来,研究人员设计了精巧的技术,将基因元件组装成更大的构建体。最近,对复杂DNA构建体的需求不断增加,促使人们进行了无数次尝试,以优化DNA组装方法,提高效率、保真度和模块化程度。这些努力产生了简单、稳健、标准化且快速的方案,能够实施高通量DNA组装项目,用于构建大型合成基因构建体。最近,我们的团队开发了酵母组装法(YeastFab assembly),这是一种基于酿酒酵母天然元件设计和构建DNA构建模块的高效方法。此外,这些标准化的DNA元件可以很容易地进行表征,并组装成转录单元和途径。在本章中,我们描述了使用酵母组装法从已表征的标准化酵母元件组装途径的方案。