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受自然启发的 F 型凝集素工程改造以提高结合强度。

Nature-inspired engineering of an F-type lectin for increased binding strength.

机构信息

Institute of Microbial Technology, Sector 39-A, Chandigarh, India.

出版信息

Glycobiology. 2018 Dec 1;28(12):933-948. doi: 10.1093/glycob/cwy082.

Abstract

Individual lectin-carbohydrate interactions are usually of low affinity. However, high avidity is frequently attained by the multivalent presentation of glycans on biological surfaces coupled with the occurrence of high order lectin oligomers or tandem repeats of lectin domains in the polypeptide. F-type lectins are l-fucose binding lectins with a typical sequence motif, HX(26)RXDX(4)R/K, whose residues participate in l-fucose binding. We previously reported the presence of a few eukaryotic F-type lectin domains with partial sequence duplication that results in the presence of two l-fucose-binding sequence motifs. We hypothesized that such partial sequence duplication would result in greater avidity of lectin-ligand interactions. Inspired by this example from Nature, we attempted to engineer a bacterial F-type lectin domain from Streptosporangium roseum to attain avid binding by mimicking partial duplication. The engineered lectin demonstrated 12-fold greater binding strength than the wild-type lectin to multivalent fucosylated glycoconjugates. However, the affinity to the monosaccharide l-fucose in solution was similar and partial sequence duplication did not result in an additional functional l-fucose binding site. We also cloned, expressed and purified a Branchiostoma floridae F-type lectin domain with naturally occurring partial sequence duplication and confirmed that the duplicated region with the F-type lectin sequence motif did not participate in l-fucose binding. We found that the greater binding strength of the engineered lectin from S. roseum was instead due to increased oligomerization. We believe that this Nature-inspired strategy might be useful for engineering lectins to improve binding strength in various applications.

摘要

单个凝集素-碳水化合物相互作用通常亲和力较低。然而,糖在生物表面上的多价呈现,以及多肽中凝集素寡聚体或串联重复结构的出现,常常会导致高亲合力。F 型凝集素是结合 L-岩藻糖的凝集素,具有典型的序列基序 HX(26)RXDX(4)R/K,其残基参与 L-岩藻糖的结合。我们之前报道了一些真核 F 型凝集素结构域存在部分序列重复,导致存在两个 L-岩藻糖结合序列基序。我们假设这种部分序列重复会导致凝集素-配体相互作用的亲合力增加。受此来自大自然的例子启发,我们试图通过模拟部分重复来设计一种来自玫瑰孢链霉菌的细菌 F 型凝集素结构域,以获得高亲和力的结合。与野生型凝集素相比,该工程化的凝集素对多价岩藻糖化糖缀合物的结合强度提高了 12 倍。然而,与单糖 L-岩藻糖在溶液中的亲和力相似,且部分序列重复并未产生额外的功能性 L-岩藻糖结合位点。我们还克隆、表达和纯化了具有天然部分序列重复的佛罗里达文昌鱼 F 型凝集素结构域,并证实具有 F 型凝集素序列基序的重复区域不参与 L-岩藻糖结合。我们发现,玫瑰孢链霉菌工程化凝集素的高结合强度是由于其寡聚化程度增加所致。我们相信,这种受自然启发的策略可能有助于设计凝集素以提高在各种应用中的结合强度。

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