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深渊海杆菌属新属,新种,一种从马里亚纳海沟海水中分离出的海洋细菌。

Abyssibacter profundi gen. nov., sp. nov., a marine bacterium isolated from seawater of the Mariana Trench.

作者信息

Zhou Shun, Ren Qiaomeng, Li Yuying, Liu Jiwen, Wang Xiaolei, Wu Yanhong, Zhang Yulin, Zhang Xiao-Hua

机构信息

1​College of Marine Life Sciences, Ocean University of China, Qingdao 266003, PR China.

2​Laboratory for Marine Ecology and Environmental Science, National Laboratory for Marine Science and Technology, Qingdao 266071, PR China.

出版信息

Int J Syst Evol Microbiol. 2018 Nov;68(11):3424-3429. doi: 10.1099/ijsem.0.002999. Epub 2018 Sep 11.

Abstract

A Gram-stain-negative, strictly aerobic, short-rod-shaped bacterium, motile by a single polar flagellum, designated OUC007, was isolated from seawater at a depth of 1000 m in the Mariana Trench. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain OUC007 formed a lineage within the family Salinisphaeraceae that was distinct from the most closely related genera Oceanococcus and Salinisphaera, with 16S rRNA gene sequences similarities ranging from 89.3 to 90.8 %, respectively. Strain OUC007 grew with 0-7 % (w/v) NaCl (optimum, 2-3 %), at 10-45 °C (37 °C) and at pH 7.0-9.0 (7.0-8.0). The major respiratory quinone was ubiquinone-8 (Q-8). The polar lipids of strain OUC007 comprised one phosphatidylethanolamine and three unidentified polar lipids. The predominant fatty acid (more than 10 % of total fatty acids) was summed feature 8 (C18 : 1ω7c or/and C18 : 1ω6c). The DNA G+C content of strain OUC007 was 63.1 mol%. On the basis of polyphasic taxonomic analysis, the strain OUC007 is considered to represent a novel species in a new genus of the family Salinisphaeraceae, for which the name Abyssibacter profundi gen. nov., sp. nov. is proposed. The type strain is OUC007 (=KCTC 52933=MCCC 1K03450).

摘要

从马里亚纳海沟1000米深处的海水中分离出一株革兰氏染色阴性、严格需氧、短杆状、具单根极鞭毛运动的细菌,命名为OUC007。基于16S rRNA基因序列的系统发育分析表明,菌株OUC007在盐球菌科内形成了一个分支,与最相近的属海洋球菌属和盐球菌属不同,其16S rRNA基因序列相似性分别为89.3%至90.8%。菌株OUC007在含0 - 7%(w/v)NaCl(最适为2 - 3%)、10 - 45℃(37℃)和pH 7.0 - 9.0(7.0 - 8.0)的条件下生长。主要呼吸醌为泛醌-8(Q - 8)。菌株OUC007的极性脂质包括一种磷脂酰乙醇胺和三种未鉴定的极性脂质。主要脂肪酸(占总脂肪酸的10%以上)为总和特征8(C18:1ω7c或/和C18:1ω6c)。菌株OUC007的DNA G + C含量为63.1 mol%。基于多相分类分析,菌株OUC007被认为代表盐球菌科一个新属中的一个新物种,为此提出新属名为深渊杆菌属(Abyssibacter gen. nov.),新种名为深渊深渊杆菌(Abyssibacter profundi sp. nov.)。模式菌株为OUC007(=KCTC 52933 = MCCC 1K03450)。

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