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一种具有自养甲基营养能力的新型代尔夫特菌植物共生体

[A novel Delftia plant symbiont capable of autotrophic methylotrophy].

作者信息

Agafonova N V, Doronina N V, Kaparullina E N, Fedorov D N, Gafarov A B, Sazonova O I, Sokolov S L, Trotsenko Yu A

出版信息

Mikrobiologiia. 2017 Jan-Feb;86(1):88-98.

PMID:30207147
Abstract

A facultative methylotrophic bacterium, strain Lp-1, which was isolated from root nodules of lupine (Lupinus polyphyllus L.) on the medium with methanol as a carbon and energy source, exhibited high similarity of the 16S rRNA gene sequences to Delftia strains (94‒99.9%). The cells of Delftia sp. Lp-1 were motile gram-negative rods dividing by binary fission. Predominant fatty acids were C16:0 (34.2%), C16:1ω9 (14.5%), and C18:1ω7c (17.3%). Phosphatidylethanolamine, phosphatidylcholine, and phosphatidylglycerol were the dominant phospholipids. Q8 was the major ubiquinone. Optimal growth occurred at 24‒26°C and pH 7.1‒7.3; growth was inhibited by 1% NaCl. The organism oxidized methanol with the classical methanol dehydrogenase and used the ribulose bisphosphate pathway of C1 metabolism. Analysis of translated amino acid sequence of the large subunit of the MxaF methanol dehydrogenase revealed 85.5‒94% similarity to the sequences of such autotrophic methylotrophs of the class Alphaproteobacteria as Angulomicrobium, Starkeya, and Ancylobacter, indicating the possible acquisition of the mxaF gene via horizontal gene transfer. Delftia sp. Lp-1 (VKM B-3039, DSM 24446), the first methylotrophic member of the genus Delftia, was shown to be a plant symbiont, stimulating plant growth and morphogenesis, increasing the level of photosynthetic pigments and specific leaf weight. It possesses the nifH gene of nitrogen fixation, is capable of phosphate solubilization, synthesis of auxins and siderophores, and is antagonistic to plant pathogenic fungi and bacilli.

摘要

从羽扇豆(多叶羽扇豆)根瘤中分离得到的一株兼性甲基营养细菌Lp-1,能在以甲醇作为碳源和能源的培养基上生长。该菌株16S rRNA基因序列与代尔夫特菌属菌株高度相似(94‒99.9%)。代尔夫特菌属Lp-1菌株的细胞为革兰氏阴性、具运动性的杆状菌,通过二分裂进行繁殖。主要脂肪酸为C16:0(34.2%)、C16:1ω9(14.5%)和C18:1ω7c(17.3%)。磷脂酰乙醇胺、磷脂酰胆碱和磷脂酰甘油是主要的磷脂。泛醌Q8是主要的泛醌。最适生长温度为24‒26°C,最适pH值为7.1‒7.3;1%的NaCl会抑制其生长。该菌利用经典的甲醇脱氢酶氧化甲醇,并采用核酮糖二磷酸途径进行C1代谢。对MxaF甲醇脱氢酶大亚基的翻译氨基酸序列分析表明,其与α-变形菌纲自养甲基营养菌如角形微菌属、斯塔基菌属和弯曲杆菌属的序列相似性为85.5‒94%,这表明mxaF基因可能是通过水平基因转移获得的。代尔夫特菌属Lp-1菌株(VKM B-3039,DSM 24446)是代尔夫特菌属的首个甲基营养成员,它被证明是一种植物共生菌,能促进植物生长和形态建成,提高光合色素水平和比叶重。它拥有固氮nifH基因,能够溶解磷、合成生长素和铁载体,并且对植物病原真菌和杆菌具有拮抗作用。

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