Gašić Katarina, Kuzmanović Nemanja, Ivanović Milan, Prokić Anđelka, Šević Milan, Obradović Aleksa
Institute for Plant Protection and Environment (IZBIS), Belgrade, Serbia.
Institute for Epidemiology and Pathogen Diagnostics, Federal Research Centre for Cultivated Plants, Julius Kühn-Institut, Braunschweig, Germany.
Front Microbiol. 2018 Aug 29;9:2021. doi: 10.3389/fmicb.2018.02021. eCollection 2018.
phage KΦ1, a member of family, was isolated from the rhizosphere of pepper plants showing symptoms of bacterial spot. The phage strain expressed antibacterial activity to all strains tested and did not lyse other spp., nor other less related bacterial species. The genome of KΦ1 is double-stranded DNA of 46.077 bp including 66 open reading frames and an average GC content of 62.9%, representing the first complete genome sequence published for a phage infecting xanthomonads associated with pepper or tomato. The highest genome similarity was observed between phage KΦ1 and the pv. specific phage OP2. On the other hand, when compared with other members of the genus , the genome similarity was lower. Forty-four (67%) predicted KΦ1 proteins shared homology with phage OP2, while 20 genes (30%) were unique to KΦ1. Phage KΦ1, which is chloroform resistant and stable in different media and in the pH range 5-11, showed a high titer storage ability for at least 2 years at +4°C. Copper-hydroxide and copper-oxychloride reduced phage activity proportionally to the used concentrations and the exposure time. UV light was detrimental to the phage strain, but skim milk plus sucrose formulation extended its survival . The phages survived for at least 7 days on the surface of pepper leaves in the greenhouse, showing the ability to persist on the plant tissue without the presence of the host bacterium. Results of three repeated experiments showed that foliar applications of the unformulated KΦ1 phage suspension effectively controlled pepper bacterial spot compared to the standard treatment and the untreated control. The integration of the phage KΦ1 and copper-hydroxide treatments resulted in an increased efficacy compared to the copper-hydroxide alone.
噬菌体KΦ1是该家族的一员,它从表现出细菌性斑点症状的辣椒植物根际中分离得到。该噬菌体菌株对所有测试菌株均表现出抗菌活性,且不裂解其他黄单胞菌属物种,也不裂解其他亲缘关系较远的细菌物种。KΦ1的基因组是46077 bp的双链DNA,包含66个开放阅读框,平均GC含量为62.9%,这代表了首个发表的感染与辣椒或番茄相关的黄单胞菌的噬菌体的完整基因组序列。在噬菌体KΦ1与野油菜黄单胞菌致病变种特定噬菌体OP2之间观察到最高的基因组相似性。另一方面,与该属的其他成员相比,基因组相似性较低。44个(67%)预测的KΦ1蛋白与野油菜黄单胞菌噬菌体OP2具有同源性,而20个基因(30%)是KΦ1独有的。噬菌体KΦ1对氯仿具有抗性,在不同培养基以及pH值为5 - 11的范围内都很稳定,在4°C下至少2年都具有高滴度储存能力。氢氧化铜和氯氧化铜按使用浓度和暴露时间成比例地降低噬菌体活性。紫外线对该噬菌体菌株有害,但脱脂乳加蔗糖配方延长了其存活时间。这些噬菌体在温室中辣椒叶片表面至少存活7天,表明在没有宿主细菌的情况下它们有在植物组织上持续存在的能力。三次重复实验的结果表明,与标准处理和未处理的对照相比,未配制的KΦ1噬菌体悬浮液叶面喷施能有效控制辣椒细菌性斑点。与单独使用氢氧化铜相比,噬菌体KΦ1和氢氧化铜处理相结合提高了防治效果。