• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

十字花科植物及其近缘物种微卫星标记的特征分析

Characterization of microsatellite markers for (Brassicaceae) and related species.

作者信息

Cuenot Yves, Gómez José M, González-Megias Adela, Pannell John R, Torices Rubén

机构信息

Department of Ecology and Evolution Université de Lausanne CH-1015 Lausanne Switzerland.

Estación Experimental de Zonas Áridas Consejo Superior de Investigaciones Científicas Ctra. de Sacramento s/n, La Cañada de San Urbano E-04120 Almería Spain.

出版信息

Appl Plant Sci. 2018 Aug 21;6(8):e01172. doi: 10.1002/aps3.1172. eCollection 2018 Aug.

DOI:10.1002/aps3.1172
PMID:30214835
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6110244/
Abstract

PREMISE OF THE STUDY

Polymorphic microsatellite markers were developed to study population structure and mating patterns of the monocarpic herb (Brassicaceae).

METHODS AND RESULTS

Illumina MiSeq sequencing was used to develop a panel of 15 polymorphic microsatellite markers that were tested across 77 individuals from three populations on the Iberian Peninsula. All markers were polymorphic in at least two studied populations, and the number of alleles ranged from one to 11 per locus. The levels of observed and expected heterozygosity ranged from 0.000 to 1.000 and from 0.153 to 0.865, respectively. Nine and 11 loci were successfully amplified in the congeneric species and , respectively.

CONCLUSIONS

The 15 microsatellite markers will be useful for population genetic studies of the genus . These markers will serve as a useful tool for exploring population structure and mating patterns of .

摘要

研究前提

开发多态性微卫星标记以研究单果草本植物(十字花科)的种群结构和交配模式。

方法与结果

使用Illumina MiSeq测序开发了一组15个多态性微卫星标记,并在伊比利亚半岛三个种群的77个个体中进行了测试。所有标记在至少两个研究种群中具有多态性,每个位点的等位基因数从1到11不等。观察到的杂合度和预期杂合度水平分别为0.000至1.000和0.153至0.865。分别在同属物种和中成功扩增了9个和11个位点。

结论

这15个微卫星标记将有助于该属的种群遗传学研究。这些标记将作为探索种群结构和交配模式的有用工具。

相似文献

1
Characterization of microsatellite markers for (Brassicaceae) and related species.十字花科植物及其近缘物种微卫星标记的特征分析
Appl Plant Sci. 2018 Aug 21;6(8):e01172. doi: 10.1002/aps3.1172. eCollection 2018 Aug.
2
Whole genome sequencing and assembly data of and .……和……的全基因组测序与组装数据。 你提供的原文内容不完整,请补充完整以便我准确翻译。
Data Brief. 2021 Mar 1;35:106922. doi: 10.1016/j.dib.2021.106922. eCollection 2021 Apr.
3
Molecular phylogeny and evolutionary history of DC (Brassicaceae).十字花科菘蓝属的分子系统发育与进化史。
PeerJ. 2017 Oct 27;5:e3964. doi: 10.7717/peerj.3964. eCollection 2017.
4
Efficient regeneration systems for two closely related Moricandia species possessing a C3 or C3-C4 intermediate photosynthetic character.具有C3或C3-C4中间光合特性的两个近缘森蒂草属物种的高效再生系统。
Plant Cell Rep. 2003 Apr;21(8):707-12. doi: 10.1007/s00299-003-0579-8. Epub 2003 Feb 18.
5
Development of microsatellite markers for Crepis mollis (Asteraceae).毛小苣(菊科)微卫星标记的开发
Appl Plant Sci. 2016 Jul 7;4(7). doi: 10.3732/apps.1600022. eCollection 2016 Jul.
6
Development, characterization, and cross-amplification of 17 microsatellite markers for .用于……的17个微卫星标记的开发、特征分析及交叉扩增
Appl Plant Sci. 2019 Dec 8;7(12):e11307. doi: 10.1002/aps3.11307. eCollection 2019 Dec.
7
Characterization and development of microsatellite markers for and congeneric taxa.[具体物种]及其同属分类群的微卫星标记的特征分析与开发
Appl Plant Sci. 2019 Nov 8;7(11):e11302. doi: 10.1002/aps3.11302. eCollection 2019 Nov.
8
Isolation and characterization of microsatellite loci from (Juglandaceae).胡桃科微卫星位点的分离与鉴定
Appl Plant Sci. 2018 Dec 5;6(12):e01205. doi: 10.1002/aps3.1205. eCollection 2018 Dec.
9
Microsatellite markers for : Development, characterization, and cross-species amplification.用于:开发、表征及跨物种扩增的微卫星标记
Appl Plant Sci. 2020 Feb 14;8(2):e11323. doi: 10.1002/aps3.11323. eCollection 2020 Feb.
10
Isolation and characterization of polymorphic microsatellite loci for the three Iberian vipers, Vipera aspis, V. Latastei and V. seoanei by Illumina MiSeq sequencing.通过 Illumina MiSeq 测序分离和鉴定三种伊比利亚蝰蛇(Vipera aspis、V. Latastei 和 V. seoanei)的多态微卫星位点。
Mol Biol Rep. 2024 Feb 9;51(1):294. doi: 10.1007/s11033-024-09263-5.

本文引用的文献

1
Kin discrimination allows plants to modify investment towards pollinator attraction.亲代偏好在植物吸引传粉者的投资中起作用。
Nat Commun. 2018 May 22;9(1):2018. doi: 10.1038/s41467-018-04378-3.
2
Molecular phylogeny and evolutionary history of DC (Brassicaceae).十字花科菘蓝属的分子系统发育与进化史。
PeerJ. 2017 Oct 27;5:e3964. doi: 10.7717/peerj.3964. eCollection 2017.
3
The role of pollinators in the evolution of corolla shape variation, disparity and integration in a highly diversified plant family with a conserved floral bauplan.传粉者在一个具有保守花部基本结构的高度多样化植物科中,对花冠形状变异、差异和整合的进化过程中的作用。
Ann Bot. 2016 Apr;117(5):889-904. doi: 10.1093/aob/mcv194. Epub 2016 Feb 15.
4
Climate change effects on above- and below-ground interactions in a dryland ecosystem.气候变化对干旱生态系统地上和地下相互作用的影响。
Philos Trans R Soc Lond B Biol Sci. 2012 Nov 19;367(1606):3115-24. doi: 10.1098/rstb.2011.0346.
5
Primer3--new capabilities and interfaces.Primer3--新功能和界面。
Nucleic Acids Res. 2012 Aug;40(15):e115. doi: 10.1093/nar/gks596. Epub 2012 Jun 22.
6
genepop'007: a complete re-implementation of the genepop software for Windows and Linux.genepop'007:一个用于 Windows 和 Linux 的 genepop 软件的完全重新实现。
Mol Ecol Resour. 2008 Jan;8(1):103-6. doi: 10.1111/j.1471-8286.2007.01931.x.
7
Root herbivores and detritivores shape above-ground multitrophic assemblage through plant-mediated effects.根食草动物和碎屑食动物通过植物介导的影响塑造地上多营养层组合。
J Anim Ecol. 2010 Jul;79(4):923-31. doi: 10.1111/j.1365-2656.2010.01681.x. Epub 2010 Mar 18.
8
Enhancements and modifications of primer design program Primer3.引物设计程序Primer3的增强与修改
Bioinformatics. 2007 May 15;23(10):1289-91. doi: 10.1093/bioinformatics/btm091. Epub 2007 Mar 22.