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单一残基开关揭示抗体结构域完整性的原则。

A single residue switch reveals principles of antibody domain integrity.

机构信息

From the Center for Integrated Protein Science Munich, Departments of Chemie and.

Physik, Technische Universität München, 85748 Garching, Germany.

出版信息

J Biol Chem. 2018 Nov 2;293(44):17107-17118. doi: 10.1074/jbc.RA118.005475. Epub 2018 Sep 18.

DOI:10.1074/jbc.RA118.005475
PMID:30228183
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6222096/
Abstract

Despite their importance for antibody architecture and design, the principles governing antibody domain stability are still not understood in sufficient detail. Here, to address this question, we chose a domain from the invariant part of IgG, the C2 domain. We found that compared with other Ig domains, the isolated C2 domain is a surprisingly unstable monomer, exhibiting a melting temperature of ∼44 °C. We further show that the presence of an additional C-terminal lysine in a C2 variant substantially increases the melting temperature by ∼14 °C relative to C2 WT. To explore the molecular mechanism of this effect, we employed biophysical approaches to probe structural features of C2. The results revealed that Lys is key for the formation of three secondary structure elements: the very C-terminal β-strand and two adjacent α-helices. We also noted that a dipole interaction between Lys and the nearby α-helix, is important for stabilizing the C2 architecture by protecting the hydrophobic core. Interestingly, this interaction between the α-helix and C-terminal charged residues is highly conserved in antibody domains, suggesting that it represents a general mechanism for maintaining their integrity. We conclude that the observed interactions involving terminal residues have practical applications for defining domain boundaries in the development of antibody therapeutics and diagnostics.

摘要

尽管抗体结构域的稳定性对于抗体的结构和设计非常重要,但目前我们还没有足够详细地了解控制抗体结构域稳定性的原理。为了解决这个问题,我们选择了 IgG 不变区的一个结构域 C2 结构域。我们发现,与其他 Ig 结构域相比,分离的 C2 结构域是一个出人意料的不稳定单体,其熔点约为 44°C。我们进一步表明,在 C2 结构域变体中存在额外的 C 末端赖氨酸,相对于 C2 WT 会使熔点提高约 14°C。为了探索这种效应的分子机制,我们采用了生物物理方法来探测 C2 的结构特征。结果表明,赖氨酸对于形成三个二级结构元素至关重要:非常末端的β-链和两个相邻的α-螺旋。我们还注意到,赖氨酸和附近的α-螺旋之间的偶极相互作用对于通过保护疏水性核心来稳定 C2 结构非常重要。有趣的是,这种α-螺旋和 C 末端带电残基之间的相互作用在抗体结构域中高度保守,这表明它代表了维持其完整性的一般机制。我们得出结论,所观察到的涉及末端残基的相互作用对于定义抗体治疗和诊断药物开发中的结构域边界具有实际应用价值。

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本文引用的文献

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Characterization of long and stable de novo single alpha-helix domains provides novel insight into their stability.长且稳定的从头单α-螺旋结构域的特性为其稳定性提供了新的见解。
Sci Rep. 2017 Mar 13;7:44341. doi: 10.1038/srep44341.
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A Stable Mutant Predisposes Antibody Domains to Amyloid Formation through Specific Non-Native Interactions.一种稳定的突变体通过特定的非天然相互作用使抗体结构域易于形成淀粉样蛋白。
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The Antibody Light-Chain Linker Is Important for Domain Stability and Amyloid Formation.抗体轻链连接子对结构域稳定性和淀粉样纤维形成很重要。
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