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核仁小 RNA 端长非编码 RNA 的加工与作用。

Processing and roles of snoRNA-ended long noncoding RNAs.

机构信息

a State Key Laboratory of Molecular Biology, Shanghai Key Laboratory of Molecular Andrology, CAS Center for Excellence in Molecular Cell Science, Shanghai Institute of Biochemistry and Cell Biology , Chinese Academy of Sciences, University of Chinese Academy of Sciences , Shanghai , China.

b School of Life Science and Technology , ShanghaiTech University , Shanghai , China.

出版信息

Crit Rev Biochem Mol Biol. 2018 Dec;53(6):596-606. doi: 10.1080/10409238.2018.1508411. Epub 2018 Sep 25.


DOI:10.1080/10409238.2018.1508411
PMID:30252509
Abstract

Small nucleolar RNAs (snoRNAs) are a family of conserved nuclear RNAs that function in the modification of small nuclear RNAs (snRNAs) or ribosomal RNAs (rRNAs), or participate in the processing of rRNAs during ribosome subunit maturation. Eukaryotic DNA transcription and RNA processing produce many long noncoding RNA (lncRNA) species. Although most lncRNAs are processed like typical mRNAs to be 5' capped and 3' polyadenylated, other types of lncRNAs are stabilized from primary Pol II transcripts by alternative mechanisms. One way to generate stable lncRNAs is to co-operate with snoRNA processing to produce snoRNA-ended lncRNAs (sno-lncRNAs) and 5' snoRNA-ended and 3'-polyadenylated lncRNAs (SPAs). Rather than silently accumulating in the nucleus, some sno-lncRNAs and SPAs are involved in the regulation of pre-rRNA transcription and alternative splicing of pre-mRNAs. Here we provide a mini-review to discuss the biogenesis and functions of these unusually processed lncRNAs.

摘要

小核仁 RNA(snoRNA)是一类保守的核 RNA,其功能在于修饰小核 RNA(snRNA)或核糖体 RNA(rRNA),或参与核糖体亚基成熟过程中 rRNA 的加工。真核生物的 DNA 转录和 RNA 加工产生了许多长非编码 RNA(lncRNA)种类。尽管大多数 lncRNA 像典型的 mRNA 一样被加工,具有 5'端帽和 3'端多聚腺苷酸化,但其他类型的 lncRNA 则通过替代机制从初级 Pol II 转录物中稳定下来。产生稳定的 lncRNA 的一种方法是与 snoRNA 加工合作,产生 snoRNA 结尾的 lncRNA(sno-lncRNA)和 5' snoRNA 结尾和 3'-多聚腺苷酸化的 lncRNA(SPAs)。一些 sno-lncRNA 和 SPAs 并没有在核内默默地积累,而是参与调控前 rRNA 转录和前体 mRNA 的可变剪接。本文将提供一个小型综述,讨论这些异常加工的 lncRNA 的生物发生和功能。

相似文献

[1]
Processing and roles of snoRNA-ended long noncoding RNAs.

Crit Rev Biochem Mol Biol. 2018-9-25

[2]
Unusual Processing Generates SPA LncRNAs that Sequester Multiple RNA Binding Proteins.

Mol Cell. 2016-10-27

[3]
Long noncoding RNAs with snoRNA ends.

Mol Cell. 2012-9-6

[4]
Long noncoding RNAs: Re-writing dogmas of RNA processing and stability.

Biochim Biophys Acta. 2016-1

[5]
SPArking Interest in the Long Noncoding RNA World: A New Class of 5' SnoRNA-Stabilized LncRNA that Influences Alternative Splicing.

Mol Cell. 2016-11-3

[6]
Noncoding snoRNA host genes are a distinct subclass of long noncoding RNAs.

Trends Genet. 2023-12

[7]
The many faces of small nucleolar RNAs.

Biochim Biophys Acta. 2014-6

[8]
From Heterochromatin to Long Noncoding RNAs in Drosophila: Expanding the Arena of Gene Function and Regulation.

Adv Exp Med Biol. 2017

[9]
Species-specific alternative splicing leads to unique expression of sno-lncRNAs.

BMC Genomics. 2014-4-16

[10]
Brain-specific small nucleolar RNAs.

J Mol Neurosci. 2006

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[2]
snoRNA-facilitated protein secretion revealed by transcriptome-wide snoRNA target identification.

Cell. 2025-1-23

[3]
Nucleic Acids-Based Biomarkers for Alzheimer's Disease Diagnosis and Novel Molecules to Treat the Disease.

Int J Mol Sci. 2024-7-19

[4]
Research Progress of Long Non-coding RNA-ZFAS1 in Malignant Tumors.

Cell Biochem Biophys. 2024-12

[5]
SnoRNAs: Exploring Their Implication in Human Diseases.

Int J Mol Sci. 2024-6-29

[6]
Long Non-Coding RNAs and Their "Discrete" Contribution to IBD and Johne's Disease-What Stands out in the Current Picture? A Comprehensive Review.

Int J Mol Sci. 2023-9-1

[7]
The landscape of lncRNAs in gastric cancer: from molecular mechanisms to potential clinical applications.

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[8]
Brain alarm by self-extracellular nucleic acids: from neuroinflammation to neurodegeneration.

J Biomed Sci. 2023-8-7

[9]
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[10]
Comparative study on abortion characteristics of Nsa CMS and Pol CMS and analysis of long non-coding RNAs related to pollen abortion in Brassica napus.

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