• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

嗜热蛋白作为蛋白质工程的通用支架

Thermophilic Proteins as Versatile Scaffolds for Protein Engineering.

作者信息

Finch Anthony J, Kim Jin Ryoun

机构信息

Department of Chemical and Biomolecular Engineering, New York University, 6 MetroTech Center, Brooklyn, NY 11201, USA.

出版信息

Microorganisms. 2018 Sep 25;6(4):97. doi: 10.3390/microorganisms6040097.

DOI:10.3390/microorganisms6040097
PMID:30257429
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6313779/
Abstract

Literature from the past two decades has outlined the existence of a trade-off between protein stability and function. This trade-off creates a unique challenge for protein engineers who seek to introduce new functionality to proteins. These engineers must carefully balance the mutation-mediated creation and/or optimization of function with the destabilizing effect of those mutations. Subsequent research has shown that protein stability is positively correlated with "evolvability" or the ability to support mutations which bestow new functionality on the protein. Since the ultimate goal of protein engineering is to create and/or optimize a protein's function, highly stable proteins are preferred as potential scaffolds for protein engineering. This review focuses on the application potential for thermophilic proteins as scaffolds for protein engineering. The relatively high inherent thermostability of these proteins grants them a great deal of mutational robustness, making them promising scaffolds for various protein engineering applications. Comparative studies on the evolvability of thermophilic and mesophilic proteins have strongly supported the argument that thermophilic proteins are more evolvable than mesophilic proteins. These findings indicate that thermophilic proteins may represent the scaffold of choice for protein engineering in the future.

摘要

过去二十年的文献已经概述了蛋白质稳定性和功能之间存在权衡。这种权衡给试图为蛋白质引入新功能的蛋白质工程师带来了独特的挑战。这些工程师必须谨慎地平衡突变介导的功能创造和/或优化与这些突变的去稳定化效应。后续研究表明,蛋白质稳定性与“进化能力”呈正相关,“进化能力”即支持赋予蛋白质新功能的突变的能力。由于蛋白质工程的最终目标是创造和/或优化蛋白质的功能,高度稳定的蛋白质作为蛋白质工程的潜在支架更受青睐。本综述聚焦于嗜热蛋白质作为蛋白质工程支架的应用潜力。这些蛋白质相对较高的固有热稳定性赋予它们很大的突变稳健性,使其成为各种蛋白质工程应用的有前景的支架。对嗜热蛋白质和中温蛋白质进化能力的比较研究有力地支持了嗜热蛋白质比中温蛋白质更具进化能力这一观点。这些发现表明,嗜热蛋白质可能代表未来蛋白质工程的首选支架。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc08/6313779/e8fcb2ef40dd/microorganisms-06-00097-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc08/6313779/975701831ae6/microorganisms-06-00097-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc08/6313779/e8fcb2ef40dd/microorganisms-06-00097-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc08/6313779/975701831ae6/microorganisms-06-00097-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc08/6313779/e8fcb2ef40dd/microorganisms-06-00097-g002.jpg

相似文献

1
Thermophilic Proteins as Versatile Scaffolds for Protein Engineering.嗜热蛋白作为蛋白质工程的通用支架
Microorganisms. 2018 Sep 25;6(4):97. doi: 10.3390/microorganisms6040097.
2
Engineering Strategies to Overcome the Stability-Function Trade-Off in Proteins.工程策略克服蛋白质稳定性-功能权衡。
ACS Synth Biol. 2022 Mar 18;11(3):1030-1039. doi: 10.1021/acssynbio.1c00512. Epub 2022 Mar 8.
3
Determinants of Developability and Evolvability of Synthetic Miniproteins as Ligand Scaffolds.合成小蛋白作为配体支架的可开发性和可进化性的决定因素。
J Mol Biol. 2023 Dec 15;435(24):168339. doi: 10.1016/j.jmb.2023.168339. Epub 2023 Nov 3.
4
Charge reversal mutations in mesophilic-thermophilic orthologous protein pairs and their role in enhancing coulombic interaction energy.嗜温-嗜热直系同源蛋白对中的电荷反转突变及其在增强库仑相互作用能中的作用。
J Biomol Struct Dyn. 2023 Mar;41(5):1745-1752. doi: 10.1080/07391102.2021.2024258. Epub 2022 Jan 7.
5
Statistical Analysis of the Role of Cavity Flexibility in Thermostability of Proteins.蛋白质中腔柔韧性在热稳定性作用的统计分析
Polymers (Basel). 2024 Jan 21;16(2):291. doi: 10.3390/polym16020291.
6
Protein Thermostability Is Owing to Their Preferences to Non-Polar Smaller Volume Amino Acids, Variations in Residual Physico-Chemical Properties and More Salt-Bridges.蛋白质的热稳定性归因于它们对非极性较小体积氨基酸的偏好、残留理化性质的变化以及更多的盐桥。
PLoS One. 2015 Jul 15;10(7):e0131495. doi: 10.1371/journal.pone.0131495. eCollection 2015.
7
ProtDataTherm: A database for thermostability analysis and engineering of proteins.ProtDataTherm:一个用于蛋白质热稳定性分析与工程设计的数据库。
PLoS One. 2018 Jan 29;13(1):e0191222. doi: 10.1371/journal.pone.0191222. eCollection 2018.
8
The thermostability of DNA-binding protein HU from mesophilic, thermophilic, and extreme thermophilic bacteria.来自嗜温菌、嗜热菌和极端嗜热菌的DNA结合蛋白HU的热稳定性
Extremophiles. 2002 Feb;6(1):21-31. doi: 10.1007/s007920100235.
9
Viral protein instability enhances host-range evolvability.病毒蛋白不稳定性增强了宿主范围的进化能力。
PLoS Genet. 2022 Feb 17;18(2):e1010030. doi: 10.1371/journal.pgen.1010030. eCollection 2022 Feb.
10
Biophysical Characterization Platform Informs Protein Scaffold Evolvability.生物物理特征分析平台可获知蛋白质支架的可进化性。
ACS Comb Sci. 2019 Apr 8;21(4):323-335. doi: 10.1021/acscombsci.8b00182. Epub 2019 Feb 18.

引用本文的文献

1
From sequence to scaffold: computational design of protein nanoparticle vaccines from AlphaFold2-predicted building blocks.从序列到支架:基于AlphaFold2预测构建模块的蛋白质纳米颗粒疫苗的计算设计
bioRxiv. 2025 Aug 20:2025.08.20.671178. doi: 10.1101/2025.08.20.671178.
2
[Research on prediction model of protein thermostability integrating graph embedding and network topology features].整合图嵌入与网络拓扑特征的蛋白质热稳定性预测模型研究
Sheng Wu Yi Xue Gong Cheng Xue Za Zhi. 2025 Aug 25;42(4):817-823. doi: 10.7507/1001-5515.202501045.
3
Characterization, whole-genome sequence analysis, and protease production of a new thermophilic Bacillus licheniformis strain isolated from Debagh hot spring, Algeria.

本文引用的文献

1
Impact of disulfide bonds on the folding and refolding capability of a novel thermostable GH45 cellulase.新型热稳定 GH45 纤维素酶中二硫键对其折叠和重折叠能力的影响。
Appl Microbiol Biotechnol. 2018 Nov;102(21):9183-9192. doi: 10.1007/s00253-018-9256-2. Epub 2018 Aug 14.
2
The direction of protein evolution is destined by the stability.蛋白质的进化方向由稳定性决定。
Biochimie. 2018 Jul;150:100-109. doi: 10.1016/j.biochi.2018.05.006. Epub 2018 May 26.
3
Laboratory Evolution of Bacillus circulans Xylanase Inserted into Pyrococcus furiosus Maltodextrin-Binding Protein for Increased Xylanase Activity and Thermal Stability Toward Alkaline pH.
从阿尔及利亚德巴格温泉分离出的新型嗜热地衣芽孢杆菌菌株的特性鉴定、全基因组序列分析及蛋白酶生产
Int Microbiol. 2025 Apr;28(4):667-689. doi: 10.1007/s10123-024-00569-9. Epub 2024 Aug 12.
4
Effect of the Lys62Ala Mutation on the Thermal Stability of HPr Protein by Molecular Dynamics.赖氨酸 62 位丙氨酸突变对 HPr 蛋白热稳定性的影响:分子动力学研究
Int J Mol Sci. 2024 Jun 7;25(12):6316. doi: 10.3390/ijms25126316.
5
Abridgement of Microbial Esterases and Their Eminent Industrial Endeavors.微生物酯酶及其卓越工业应用概述
Mol Biotechnol. 2025 Mar;67(3):817-833. doi: 10.1007/s12033-024-01108-7. Epub 2024 Mar 9.
6
DeepTM: A deep learning algorithm for prediction of melting temperature of thermophilic proteins directly from sequences.DeepTM:一种直接从序列预测嗜热蛋白解链温度的深度学习算法。
Comput Struct Biotechnol J. 2023 Nov 4;21:5544-5560. doi: 10.1016/j.csbj.2023.11.006. eCollection 2023.
7
Protein Stability: Enhancement and Measurement.蛋白质稳定性:增强与测量。
Methods Mol Biol. 2023;2699:369-419. doi: 10.1007/978-1-0716-3362-5_18.
8
Alkaliphilic/Alkali-Tolerant Fungi: Molecular, Biochemical, and Biotechnological Aspects.嗜碱/耐碱真菌:分子、生化及生物技术方面
J Fungi (Basel). 2023 Jun 9;9(6):652. doi: 10.3390/jof9060652.
9
Molecular Dynamics Simulations of HPr Proteins from a Thermophilic and a Mesophilic Organism: A Comparative Thermal Study.热稳定和中温稳定的 HPr 蛋白的分子动力学模拟:比较热研究。
Int J Mol Sci. 2023 May 31;24(11):9557. doi: 10.3390/ijms24119557.
10
Temperature-sensitive contacts in disordered loops tune enzyme I activity.温度敏感接触在无序环中调节酶 I 的活性。
Proc Natl Acad Sci U S A. 2022 Nov 22;119(47):e2210537119. doi: 10.1073/pnas.2210537119. Epub 2022 Nov 14.
嗜热脂肪地芽孢杆菌麦芽糖结合蛋白插入木聚糖酶的实验室进化提高了木聚糖酶活性和在碱性 pH 下的热稳定性。
Appl Biochem Biotechnol. 2018 Apr;184(4):1232-1246. doi: 10.1007/s12010-017-2619-9. Epub 2017 Oct 6.
4
Stabilization of Bacillus circulans xylanase by combinatorial insertional fusion to a thermophilic host protein.通过与嗜热宿主蛋白进行组合插入融合来稳定环状芽孢杆菌木聚糖酶
Protein Eng Des Sel. 2017 Apr 1;30(4):281-290. doi: 10.1093/protein/gzw081.
5
Shedding light on the extra thermal stability of thermophilic proteins.揭示嗜热蛋白额外的热稳定性。
Biopolymers. 2016 Dec;105(12):856-63. doi: 10.1002/bip.22923.
6
Contribution of main chain and side chain atoms and their locations to the stability of thermophilic proteins.主链和侧链原子及其位置对嗜热蛋白质稳定性的贡献。
J Mol Graph Model. 2016 Mar;64:85-93. doi: 10.1016/j.jmgm.2016.01.001. Epub 2016 Jan 11.
7
Probing the Folding-Unfolding Transition of a Thermophilic Protein, MTH1880.探究嗜热蛋白MTH1880的折叠-去折叠转变
PLoS One. 2016 Jan 14;11(1):e0145853. doi: 10.1371/journal.pone.0145853. eCollection 2016.
8
Molecular Determinants for Protein Stabilization by Insertional Fusion to a Thermophilic Host Protein.通过插入融合到嗜热宿主蛋白实现蛋白质稳定化的分子决定因素
Chembiochem. 2015 Nov 2;16(16):2392-402. doi: 10.1002/cbic.201500310. Epub 2015 Sep 22.
9
A Highly Stable D-Amino Acid Oxidase of the Thermophilic Bacterium Rubrobacter xylanophilus.嗜热细菌嗜热栖热放线菌的一种高度稳定的D-氨基酸氧化酶。
Appl Environ Microbiol. 2014 Dec;80(23):7219-29. doi: 10.1128/AEM.02193-14. Epub 2014 Sep 12.
10
Evolvability of thermophilic proteins from archaea and bacteria.古菌和细菌的嗜热蛋白的可进化性。
Biochemistry. 2013 Jul 16;52(28):4774-80. doi: 10.1021/bi400652c. Epub 2013 Jul 3.