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[铜绿假单胞菌一种转座噬菌体基因组的两种分子结构(组成)类型]

[2 types of molecular structure (composition) of a genome in one species of transposable bacteriophages of Pseudomonas aeruginosa].

作者信息

Krylov V N, Akhverdian V Z, Khrenova E A, Cheremukhina L V, Tiaglov B V

出版信息

Genetika. 1986 Nov;22(11):2637-48.

PMID:3026895
Abstract

Comparison of heteroduplexes (HD) between DNAs of different transposable phages of Pseudomonas aeruginosa belonging to two previously described subgroups (D3112 and B3) revealed two types of structure (composition) of the bacteriophages, designated "type A" and "type B". The properties of genome structure of type A (phages of D3112 subgroup) are as follows: high level of conservation (up to 70% of genomes of different phages are represented as blocks of homologous DNA sequences); substitutions in genomes revealed as nonhomology regions in HD are, as a rule, small and located in certain sites; the distribution of the nonhomologous regions in HD of these phages is highly reproducible in independent experiments. Bacteriophages of subgroup B3 have genomes of type B: only a small part (approx. 30%) of genomes retain homology general for all of the phages; the nonhomologous regions are distributed in a large number of sites in HD; the sizes of nonhomologous regions are substantially larger than for the phages of subgroup D3112; distribution of the regions in HD is highly variable, which is characteristic of DNAs with partial homology. There is no difference between genomes of types A and B in G + C content (approx. 61-63%). Viable recombinants can be formed in crosses between phages of different genome types not only in regions with earlier revealed large DNA/DNA homology (right ends of genomes), but also in central portions of the genomes. Nevertheless, functional incompatibility of some regions of phage genomes of types A and B was demonstrated.

摘要

对铜绿假单胞菌中属于两个先前描述的亚组(D3112和B3)的不同转座噬菌体的DNA之间的异源双链体(HD)进行比较,揭示了噬菌体的两种结构(组成)类型,命名为“A型”和“B型”。A型(D3112亚组的噬菌体)基因组结构的特性如下:高度保守(不同噬菌体高达70%的基因组表现为同源DNA序列块);基因组中的取代在HD中表现为非同源区域,通常较小且位于特定位点;这些噬菌体HD中非同源区域的分布在独立实验中具有高度可重复性。B3亚组的噬菌体具有B型基因组:只有一小部分(约30%)的基因组保留了所有噬菌体共有的同源性;非同源区域分布在HD中的大量位点;非同源区域的大小比D3112亚组的噬菌体大得多;HD中区域的分布高度可变,这是具有部分同源性的DNA的特征。A型和B型基因组的G + C含量没有差异(约61 - 63%)。不仅在早期发现具有大DNA/DNA同源性的区域(基因组右端),而且在基因组的中部,不同基因组类型的噬菌体之间杂交时都可以形成有活力的重组体。然而,已证明A型和B型噬菌体基因组的某些区域存在功能不相容性。

相似文献

1
[2 types of molecular structure (composition) of a genome in one species of transposable bacteriophages of Pseudomonas aeruginosa].[铜绿假单胞菌一种转座噬菌体基因组的两种分子结构(组成)类型]
Genetika. 1986 Nov;22(11):2637-48.
2
[Pseudomonas aeruginosa bacteriophages with DNA structure similar to the DNA structure of Mu1 phage. II. Evidence for similarity between D3112, B3, and B39 bacteriophages: analysis of DNA splits by restriction endonucleases, isolation of D3112 and B3 recombinant phages].[具有与Mu1噬菌体DNA结构相似的DNA结构的铜绿假单胞菌噬菌体。II. D3112、B3和B39噬菌体之间相似性的证据:限制性内切核酸酶切割DNA的分析、D3112和B3重组噬菌体的分离]
Genetika. 1980;16(6):975-84.
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[Characteristics of phages-transposons of Pseudomonas aeruginosa belonging to 2 groups distinguished by DNA-DNA homology].[铜绿假单胞菌噬菌体 - 转座子的特征,分为通过DNA - DNA同源性区分的2组]
Genetika. 1985 May;21(5):735-47.
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[Pseudomonas aeruginosa phages whose DNA structure is similar to the DNA structure of phage Mu 1. III. The isolation and analysis of the hybrid phages D3112 and B39: localization of the immunity region and of certain genetic factors].[DNA结构与噬菌体Mu 1的DNA结构相似的铜绿假单胞菌噬菌体。III. 杂交噬菌体D3112和B39的分离与分析:免疫区域及某些遗传因子的定位]
Genetika. 1981;17(6):967-76.
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[Wide distribution of transposable phages in natural Pseudomonas aeruginosa populations].[转座噬菌体在天然铜绿假单胞菌群体中的广泛分布]
Genetika. 1984 Oct;20(10):1612-9.
6
[Role of divergence in evolution of group B3 Pseudomonas aeruginosa transposable phage evolution].
Genetika. 1998 Jun;34(6):846-9.
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[Introduction of the hybrid plasmid RP4::D3112 into Pseudomonas putida cells requires the presence of specific mutation in the phage genome].[将杂交质粒RP4::D3112导入恶臭假单胞菌细胞需要噬菌体基因组中存在特定突变]
Genetika. 1984 Jun;20(6):907-14.
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[Modular structure of the genes of phages-transposons of Pseudomonas aeruginosa].[铜绿假单胞菌噬菌体-转座子基因的模块化结构]
Genetika. 1985 May;21(5):724-34.
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[Natural interspecific hybrids of transposable phages of Pseudomonas aeruginosa].
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[Differences in the allele state of genes controlling the specificity of adsorption in transposable phages of Pseudomonas aeruginosa].[铜绿假单胞菌转座噬菌体中控制吸附特异性的基因等位基因状态的差异]
Genetika. 1986 Jul;22(7):1093-8.

引用本文的文献

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A genetic approach to the development of new therapeutic phages to fight pseudomonas aeruginosa in wound infections.利用遗传方法开发新的治疗性噬菌体来对抗伤口感染中的铜绿假单胞菌。
Viruses. 2012 Dec 21;5(1):15-53. doi: 10.3390/v5010015.
2
DNA homology in species of bacteriophages active on Pseudomonas aeruginosa.对铜绿假单胞菌有活性的噬菌体物种中的DNA同源性。
Arch Virol. 1993;131(1-2):141-51. doi: 10.1007/BF01379086.