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HP-2023的全基因组概述,对其染料变色机制的新见解。

Genome-wide overview of HP-2023, new insights into its mechanism of dye discoloration.

作者信息

Bulacio Gil Natalia María, Pajot Hipólito Fernando, Rosales Soro María Del Milagro, de Figueroa Lucía Inés Castellanos, Kurth Daniel

机构信息

1PROIMI-CONICET (Planta Piloto de Procesos Industriales Microbiológicos), Av. Belgrano y Caseros (T4001MVB), Tucuman, Argentina.

2Microbiología Superior, Facultad de Bioquímica, Química y Farmacia, Universidad Nacional de Tucumán, Tucumán, Argentina.

出版信息

3 Biotech. 2018 Oct;8(10):440. doi: 10.1007/s13205-018-1465-y. Epub 2018 Oct 5.

Abstract

HP-2023 completely discolorised Reactive Black 5 (200 mg/l) in 24 h. Manganese peroxidase and phenoloxidase, but no laccase activities were detected throughout the incubation. Total aromatic amines in media with Reactive Black 5 decreased 83% after 24 h, supporting an oxidative mechanism of azo dye discoloration. To unravel the genetic basis of these activities, the genome of HP-2023 was sequenced, assembled and annotated de novo. HP-2023 genome comprises 30 MB with a G+C content of 60.75% and 9019 gene models. Thirty-three putative carbohydrate-active enzymes with auxiliary activities, probably involved in lignin degradation and dye discoloration, were identified in the annotated genome, including two laccases, four extracellular fungal heme-peroxidases, nineteen hydrogen peroxide-producing enzymes, and four benzoquinone oxidoreductases. This report will facilitate further studies of textile-dye discoloration with this and closely related strains and poses questions about the ligninolytic potential of HP-2023 and related species.

摘要

HP - 2023在24小时内使活性黑5(200毫克/升)完全脱色。在整个培养过程中检测到了锰过氧化物酶和酚氧化酶,但未检测到漆酶活性。含有活性黑5的培养基中的总芳香胺在24小时后减少了83%,这支持了偶氮染料脱色的氧化机制。为了揭示这些活性的遗传基础,对HP - 2023的基因组进行了从头测序、组装和注释。HP - 2023基因组包含30兆碱基,G+C含量为60.75%,有9019个基因模型。在注释基因组中鉴定出33种具有辅助活性的推定碳水化合物活性酶,可能参与木质素降解和染料脱色,包括两种漆酶、四种细胞外真菌血红素过氧化物酶、十九种产过氧化氢酶和四种苯醌氧化还原酶。本报告将有助于进一步研究该菌株及密切相关菌株对纺织染料的脱色作用,并对HP - 2023及相关物种的木质素分解潜力提出问题。

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