Chen Po-Chia, Hennig Janosch
Structural and Computational Biology Unit, European Molecular Biology Laboratory Heidelberg, Meyerhofstrasse 1, 69126, Heidelberg, Germany.
Biophys Rev. 2018 Oct;10(5):1295-1310. doi: 10.1007/s12551-018-0464-x. Epub 2018 Oct 10.
In many biomolecular interactions, changes in the assembly states and structural conformations of participants can act as a complementary reporter of binding to functional and thermodynamic assays. This structural information is captured by a number of structural biology and biophysical techniques that are viable either as primary screens in small-scale applications or as secondary screens to complement higher throughput methods. In particular, small-angle X-ray scattering (SAXS) reports the average distance distribution between all atoms after orientational averaging. Such information is important when for example investigating conformational changes involved in inhibitory and regulatory mechanisms where binding events do not necessarily cause functional changes. Thus, we summarise here the current and prospective capabilities of SAXS-based screening in the context of other methods that yield structural information. Broad guidelines are also provided to assist readers in preparing screening protocols that are tailored to available X-ray sources.
在许多生物分子相互作用中,参与分子的组装状态和结构构象变化可作为与功能和热力学分析相结合的结合报告分子。这种结构信息可通过多种结构生物学和生物物理技术获取,这些技术既适用于小规模应用中的初步筛选,也可作为补充高通量方法的二次筛选。特别是,小角X射线散射(SAXS)报告了取向平均后所有原子之间的平均距离分布。例如,在研究抑制和调节机制中涉及的构象变化时,此类信息很重要,因为结合事件不一定会导致功能变化。因此,我们在此总结了基于SAXS的筛选在其他产生结构信息的方法背景下的当前和未来能力。还提供了广泛的指导方针,以帮助读者制定适合现有X射线源的筛选方案。