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编码多药耐药ABC转运蛋白的旁系同源基因和 源于近期的一次复制事件,是该属特有的。 (你提供的原文中“and,”表述不太准确完整,可能会影响理解,以上是根据现有内容尽量准确翻译的结果。)

The Paralogous Genes and , Encoding Multidrug Resistance ABC Transporters, Derive From a Recent Duplication Event, Being Specific to the Genus.

作者信息

Godinho Cláudia P, Dias Paulo J, Ponçot Elise, Sá-Correia Isabel

机构信息

iBB-Institute for Bioengineering and Biosciences, Department of Bioengineering, Instituto Superior Técnico, Universidade de Lisboa, Lisbon, Portugal.

出版信息

Front Genet. 2018 Oct 15;9:476. doi: 10.3389/fgene.2018.00476. eCollection 2018.

Abstract

Pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters play a key role in the simultaneous acquisition of resistance to a wide range of structurally and functionally unrelated cytotoxic compounds in yeasts. Pdr18 was proposed to transport ergosterol at the plasma membrane, contributing to the maintenance of adequate ergosterol content and decreased levels of stress-induced membrane disorganization and permeabilization under multistress challenge leading to resistance to ethanol, acetic acid and the herbicide 2,4-D, among other compounds. is a paralog of , first described as a determinant of resistance to the chemical mutagen 4-NQO. The phylogenetic and neighborhood analysis performed in this work to reconstruct the evolutionary history of gene in Saccharomycetaceae yeasts was focused on the 214 Pdr18/Snq2 homologs from the genomes of 117 strains belonging to 29 yeast species across that family. Results support the idea that a single duplication event occurring in the common ancestor of the genus yeasts was at the origin of and , and that by chromosome translocation gained a subtelomeric region location in chromosome XIV. The multidrug/multixenobiotic phenotypic profiles of Δ and Δ deletion mutants were compared, as well as the susceptibility profile for Δ deletion mutant, given that this yeast species has diverged previously to the duplication event on the origin of and genes and encode only one Pdr18/Snq2 homolog. Results show a significant overlap between ScSnq2 and CgSnq2 roles in multidrug/multixenobiotic resistance (MDR/MXR) as well as some overlap in azole resistance between ScPdr18 and CgSnq2. The fact that ScSnq2 and ScPdr18 confer resistance to different sets of chemical compounds with little overlapping is consistent with the subfunctionalization and neofunctionalization of these gene copies. The elucidation of the real biological role of will enlighten this issue. Remarkably, s only found in genus genomes and is present in almost all the recently available 1,000 deep coverage genomes of natural isolates, consistent with the relevant encoded physiological function.

摘要

ATP结合盒(ABC)转运蛋白的多药耐药(PDR)家族在酵母同时获得对多种结构和功能不相关的细胞毒性化合物的抗性中起关键作用。有人提出Pdr18在质膜上转运麦角固醇,有助于维持足够的麦角固醇含量,并在多重应激挑战下降低应激诱导的膜紊乱和通透性水平,从而导致对乙醇、乙酸和除草剂2,4-D等化合物产生抗性。 是 的旁系同源物,最初被描述为对化学诱变剂4-NQO抗性的决定因素。在这项工作中进行的系统发育和邻域分析,以重建酿酒酵母科酵母中 基因的进化历史,重点关注来自该科29个酵母物种的117个菌株基因组中的214个Pdr18/Snq2同源物。结果支持这样一种观点,即酵母属共同祖先中发生的一次复制事件是 和 的起源,并且通过染色体易位, 在第十四条染色体上获得了一个亚端粒区域位置。比较了Δ 和Δ缺失突变体的多药/多异生物质表型谱,以及Δ缺失突变体的敏感性谱,因为该酵母物种在 和 基因起源的复制事件之前已经分化,并且只编码一个Pdr18/Snq2同源物。结果表明,ScSnq2和CgSnq2在多药/多异生物质抗性(MDR/MXR)中的作用有显著重叠,ScPdr18和CgSnq2在唑类抗性方面也有一些重叠。ScSnq2和ScPdr18赋予对不同化学化合物组的抗性且几乎没有重叠这一事实,与这些基因拷贝的亚功能化和新功能化一致。对 的实际生物学作用的阐明将有助于解决这个问题。值得注意的是, 仅在酵母属基因组中发现,并且几乎存在于所有最近可用的1000个自然分离株的深度覆盖基因组中,这与相关的编码生理功能一致。

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