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通过偶极耦合-化学位移张量相关固态 NMR 研究肽和蛋白质中的肽键构象。

Peptide bond conformation in peptides and proteins probed by dipolar coupling-chemical shift tensor correlation solid-state NMR.

机构信息

Department of Chemistry and Biochemistry, The Ohio State University, Columbus, OH 43210, United States.

Department of Chemistry and Biochemistry, The Ohio State University, Columbus, OH 43210, United States.

出版信息

J Magn Reson. 2018 Dec;297:152-160. doi: 10.1016/j.jmr.2018.10.015. Epub 2018 Oct 30.

Abstract

Multidimensional magic-angle spinning solid-state NMR experiments are described that permit cis and trans peptide bonds in uniformly C,N-labeled peptides and proteins to be unambiguously distinguished in residue-specific manner by determining the relative orientations of the amide C' CSA and H-N dipolar coupling tensors. The experiments are demonstrated for model peptides glycylglycine and 2,5-diketopiperazine containing trans and cis peptide bonds, respectively. Subsequently, the measurements are extended to two representative proteins that contain exclusively trans peptide bonds, microcrystalline B3 immunoglobulin domain of protein G and Y145Stop human prion protein amyloid fibrils, to illustrate their applicability to a wide range of protein systems.

摘要

多维魔角旋转固态 NMR 实验可用于通过确定酰胺 C' CSA 和 H-N 偶极耦合张量的相对取向,以残基特异性方式明确区分均¹³C,¹⁵N 标记的肽和蛋白质中的顺式和反式肽键。该实验通过含有顺式和反式肽键的模型肽甘氨酰甘氨酸和 2,5-二酮哌嗪进行了演示。随后,将这些测量扩展到两个仅含有反式肽键的代表性蛋白质,即蛋白 G 的 B3 免疫球蛋白结构域和 Y145Stop 人朊病毒蛋白淀粉样纤维,以说明它们在广泛的蛋白质系统中的适用性。

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