Li Wei, Sun Kuan, Ren Zhongying, Song Chengxiang, Pei Xiaoyu, Liu Yangai, Wang Zhenyu, He Kunlun, Zhang Fei, Zhou Xiaojian, Ma Xiongfeng, Yang Daigang
State Key Laboratory of Cotton Biology, Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Anyang, China.
College of Agriculture, Yangtze University, Jingzhou, China.
Front Genet. 2018 Oct 23;9:494. doi: 10.3389/fgene.2018.00494. eCollection 2018.
Sucrose transporters (SUTs) play key roles in allocating the translocation of assimilates from source to sink tissues. Although the characteristics and biological roles of have been intensively investigated in higher plants, this gene family has not been functionally characterized in cotton. In this study, we performed a comprehensive analysis of genes in the tetraploid cotton . A total of 18 genes were identified and classified into three groups based on their evolutionary relationships. Up to eight genes in were placed in the dicot-specific SUT1 group, while four and six genes were, respectively, clustered into SUT4 and SUT2 groups together with members from both dicot and monocot species. The genes within the same group displayed similar exon/intron characteristics, and homologous genes in At and Dt subgenomes, , and exhibited one-to-one relationships. Additionally, the duplicated genes in the diploid and polyploid cotton species have evolved through purifying selection, suggesting the strong conservation of loci in these species. Expression analysis in different tissues indicated that genes might play significant roles in cotton fiber elongation. Moreover, analyses of -acting regulatory elements in promoter regions and expression profiling under different abiotic stress and exogenous phytohormone treatments implied that genes, especially , might participate in plant responses to diverse abiotic stresses and phytohormones. Our findings provide valuable information for future studies on the evolution and function of genes in cotton.
蔗糖转运蛋白(SUTs)在将同化物从源组织转运到库组织的分配过程中起着关键作用。尽管在高等植物中已经对其特征和生物学作用进行了深入研究,但该基因家族在棉花中尚未进行功能鉴定。在本研究中,我们对四倍体棉花中的该基因进行了全面分析。共鉴定出18个该基因,并根据其进化关系分为三组。在陆地棉中,多达8个该基因被归入双子叶植物特有的SUT1组,而4个和6个该基因分别与双子叶和单子叶物种的成员一起聚类到SUT4和SUT2组。同一组内的该基因显示出相似的外显子/内含子特征,并且在At和Dt亚基因组、雷蒙德氏棉和海岛棉中的同源基因呈现出一一对应的关系。此外,二倍体和多倍体棉花物种中的重复基因通过纯化选择进化,表明这些物种中该基因座具有很强的保守性。不同组织中的表达分析表明,该基因可能在棉花纤维伸长中起重要作用。此外,对启动子区域顺式作用调控元件的分析以及在不同非生物胁迫和外源植物激素处理下的表达谱分析表明,该基因,尤其是某个基因,可能参与植物对多种非生物胁迫和植物激素的反应。我们的研究结果为未来棉花中该基因的进化和功能研究提供了有价值的信息。