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通过亲和层析鉴定的一种折叠的染色体相关蛋白与大肠杆菌单链DNA结合蛋白的相互作用。

Interaction of a folded chromosome-associated protein with single-stranded DNA-binding protein of Escherichia coli, identified by affinity chromatography.

作者信息

Perrino F W, Meyer R R, Bobst A M, Rein D C

机构信息

Department of Biological Sciences, University of Cincinnati, Ohio 45221.

出版信息

J Biol Chem. 1988 Aug 25;263(24):11833-9.

PMID:3042782
Abstract

A single-stranded DNA-binding protein (SSB) affinity column was prepared by optimizing the coupling of Escherichia coli single-stranded DNA-binding protein to Affi-Gel 10. The bound SSB retained its ability to specifically bind single-stranded DNA. When nuclease-treated cell extracts were incubated with the SSB beads overnight at 4 degrees C, a major protein of Mr = 25,000 was bound. At shorter incubation times, two additional proteins of Mr = 32,000 and 36,000 were also detected. In the absence of nuclease treatment, eight additional proteins ranging from Mr = 14,000 to 160,000 also bound to the affinity column. The major Mr = 25,000 protein has been shown to be a folded chromosome-associated protein. Its binding to SSB is strongly enhanced by the addition of DNA polymerase III or DNA polymerase III holoenzyme.

摘要

通过优化大肠杆菌单链DNA结合蛋白与Affi-Gel 10的偶联制备了单链DNA结合蛋白(SSB)亲和柱。结合的SSB保留了其特异性结合单链DNA的能力。当用核酸酶处理的细胞提取物在4℃下与SSB珠一起孵育过夜时,一种分子量为25,000的主要蛋白质被结合。在较短的孵育时间下,还检测到另外两种分子量分别为32,000和36,000的蛋白质。在没有核酸酶处理的情况下,另外八种分子量从14,000到160,000的蛋白质也与亲和柱结合。已证明分子量为25,000的主要蛋白质是一种折叠的染色体相关蛋白。添加DNA聚合酶III或DNA聚合酶III全酶可强烈增强其与SSB的结合。

相似文献

1
Interaction of a folded chromosome-associated protein with single-stranded DNA-binding protein of Escherichia coli, identified by affinity chromatography.通过亲和层析鉴定的一种折叠的染色体相关蛋白与大肠杆菌单链DNA结合蛋白的相互作用。
J Biol Chem. 1988 Aug 25;263(24):11833-9.
2
Strand displacement by DNA polymerase III occurs through a tau-psi-chi link to single-stranded DNA-binding protein coating the lagging strand template.DNA聚合酶III的链置换通过与覆盖滞后链模板的单链DNA结合蛋白的τ-ψ-χ连接发生。
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The chi psi subunits of DNA polymerase III holoenzyme bind to single-stranded DNA-binding protein (SSB) and facilitate replication of an SSB-coated template.DNA聚合酶III全酶的χψ亚基与单链DNA结合蛋白(SSB)结合,并促进被SSB覆盖的模板的复制。
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Effects of the Escherichia coli SSB protein on the binding of Escherichia coli RecA protein to single-stranded DNA. Demonstration of competitive binding and the lack of a specific protein-protein interaction.大肠杆菌单链结合蛋白(SSB)对大肠杆菌重组蛋白A(RecA)与单链DNA结合的影响。竞争性结合的证明及特定蛋白质-蛋白质相互作用的缺失。
J Mol Biol. 1987 Jan 5;193(1):81-95. doi: 10.1016/0022-2836(87)90629-2.
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Purification and characterization of a protein from Saccharomyces cerevisiae that binds tightly to single-stranded DNA and stimulates a cognate strand exchange protein.从酿酒酵母中纯化和鉴定一种与单链DNA紧密结合并刺激同源链交换蛋白的蛋白质。
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Effects of Escherichia coli SSB protein on the single-stranded DNA-dependent ATPase activity of Escherichia coli RecA protein. Evidence that SSB protein facilitates the binding of RecA protein to regions of secondary structure within single-stranded DNA.大肠杆菌单链结合蛋白(SSB)对大肠杆菌重组蛋白A(RecA)单链DNA依赖性ATP酶活性的影响。证据表明SSB蛋白促进RecA蛋白与单链DNA二级结构区域的结合。
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8
Biochemical interaction of the Escherichia coli RecF, RecO, and RecR proteins with RecA protein and single-stranded DNA binding protein.大肠杆菌RecF、RecO和RecR蛋白与RecA蛋白及单链DNA结合蛋白的生化相互作用。
Proc Natl Acad Sci U S A. 1993 May 1;90(9):3875-9. doi: 10.1073/pnas.90.9.3875.
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Escherichia coli single-stranded DNA binding protein SSB promotes AlkB-mediated DNA dealkylation repair.大肠杆菌单链DNA结合蛋白SSB促进AlkB介导的DNA去烷基化修复。
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Escherichia coli AlkB interacts with single-stranded DNA binding protein SSB by an intrinsically disordered region of SSB.大肠杆菌AlkB通过单链DNA结合蛋白SSB的一个内在无序区域与SSB相互作用。
Mol Biol Rep. 2018 Oct;45(5):865-870. doi: 10.1007/s11033-018-4232-6. Epub 2018 Jul 4.

引用本文的文献

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The mechanism of action of the SSB interactome reveals it is the first OB-fold family of genome guardians in prokaryotes.SSB 相互作用组的作用机制揭示了它是原核生物中第一个 OB 折叠家族的基因组守护者。
Protein Sci. 2021 Sep;30(9):1757-1775. doi: 10.1002/pro.4140. Epub 2021 Jun 14.
2
Devoted to the lagging strand-the subunit of DNA polymerase III holoenzyme contacts SSB to promote processive elongation and sliding clamp assembly.专门针对滞后链——DNA聚合酶III全酶的亚基与单链结合蛋白(SSB)接触,以促进持续延伸和滑动夹组装。
EMBO J. 1998 Apr 15;17(8):2436-49. doi: 10.1093/emboj/17.8.2436.
3
Proofreading by the epsilon subunit of Escherichia coli DNA polymerase III increases the fidelity of calf thymus DNA polymerase alpha.
大肠杆菌DNA聚合酶III的ε亚基校对可提高小牛胸腺DNA聚合酶α的保真度。
Proc Natl Acad Sci U S A. 1989 May;86(9):3085-8. doi: 10.1073/pnas.86.9.3085.
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The single-stranded DNA-binding protein of Escherichia coli.大肠杆菌的单链DNA结合蛋白。
Microbiol Rev. 1990 Dec;54(4):342-80. doi: 10.1128/mr.54.4.342-380.1990.