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Mutational analysis of the HIS4 translational initiator region in Saccharomyces cerevisiae.

作者信息

Cigan A M, Pabich E K, Donahue T F

机构信息

Department of Molecular Biology, Northwestern University Medical School, Chicago, Illinois 60611.

出版信息

Mol Cell Biol. 1988 Jul;8(7):2964-75. doi: 10.1128/mcb.8.7.2964-2975.1988.

DOI:10.1128/mcb.8.7.2964-2975.1988
PMID:3043201
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC363516/
Abstract

We have mutated various features of the 5' noncoding region of the HIS4 mRNA in light of established Saccharomyces cerevisiae and mammalian consensus translational initiator regions. Our analysis indicates that insertion mutations that introduce G + C-rich sequences in the leader, particularly those that result in stable stem-loop structures in the 5' noncoding region of the HIS4 message, severely affect translation initiation. Mutations that alter the length of the HIS4 leader from 115 to 39 nucleotides had no effect on expression, and sequence context changes both 5' and 3' to the HIS4 AUG start codon resulted in no more than a twofold decrease of expression. Changing the normal context at HIS4 5'-AAUAAUGG-3' to the optimal sequence context proposed for mammalian initiator regions 5'-CACCAUGG-3' did not result in stimulation of HIS4 expression. These studies, in conjunction with comparative and genetic studies in S. cerevisiae, support a general mechanism of initiation of protein synthesis as proposed by the ribosomal scanning model.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29e1/363516/94d84472f031/molcellb00067-0306-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29e1/363516/5646fa19298c/molcellb00067-0305-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29e1/363516/94d84472f031/molcellb00067-0306-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29e1/363516/5646fa19298c/molcellb00067-0305-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29e1/363516/94d84472f031/molcellb00067-0306-a.jpg

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Mutational analysis of the HIS4 translational initiator region in Saccharomyces cerevisiae.
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Functional analysis of the AUG initiator codon context reveals novel conserved sequences that disfavor mRNA translation in eukaryotes.AUG 起始密码子上下文的功能分析揭示了新型保守序列,这些序列不利于真核生物的 mRNA 翻译。

本文引用的文献

1
Possible role of flanking nucleotides in recognition of the AUG initiator codon by eukaryotic ribosomes.侧翼核苷酸在真核生物核糖体识别AUG起始密码子中的可能作用。
Nucleic Acids Res. 1981 Oct 24;9(20):5233-52. doi: 10.1093/nar/9.20.5233.
2
A possible novel interaction between the 3'-end of 18 S ribosomal RNA and the 5'-leader sequence of many eukaryotic messenger RNAs.18 S核糖体RNA的3'端与许多真核生物信使RNA的5'前导序列之间可能存在一种新型相互作用。
FEBS Lett. 1982 Oct 18;147(2):133-6. doi: 10.1016/0014-5793(82)81026-0.
3
The nucleotide sequence of the HIS4 region of yeast.
Nucleic Acids Res. 2024 Feb 9;52(3):1064-1079. doi: 10.1093/nar/gkad1152.
4
Rapid 40S scanning and its regulation by mRNA structure during eukaryotic translation initiation.真核翻译起始中 mRNA 结构对快速 40S 扫描的调控
Cell. 2022 Nov 23;185(24):4474-4487.e17. doi: 10.1016/j.cell.2022.10.005. Epub 2022 Nov 4.
5
Increased expression of the fluorescent reporter protein ymNeonGreen in by reducing RNA secondary structure near the start codon.通过减少起始密码子附近的RNA二级结构来增加荧光报告蛋白ymNeonGreen在……中的表达。 (原文中“in by”表述有误,推测完整句子可能是“In [某个具体体系或细胞等] by...” ,这里按纠正后的大致意思翻译)
Biotechnol Rep (Amst). 2021 Dec 31;33:e00697. doi: 10.1016/j.btre.2021.e00697. eCollection 2022 Mar.
6
Control of translation by eukaryotic mRNA transcript leaders-Insights from high-throughput assays and computational modeling.真核 mRNA 转录起始区对翻译的控制——来自高通量检测和计算模型的新见解。
Wiley Interdiscip Rev RNA. 2021 May;12(3):e1623. doi: 10.1002/wrna.1623. Epub 2020 Aug 31.
7
Antisense oligonucleotides targeting translation inhibitory elements in 5' UTRs can selectively increase protein levels.靶向5'非翻译区翻译抑制元件的反义寡核苷酸可选择性地提高蛋白质水平。
Nucleic Acids Res. 2017 Sep 19;45(16):9528-9546. doi: 10.1093/nar/gkx632.
8
EIF2S3 Mutations Associated with Severe X-Linked Intellectual Disability Syndrome MEHMO.与严重X连锁智力残疾综合征MEHMO相关的EIF2S3突变
Hum Mutat. 2017 Apr;38(4):409-425. doi: 10.1002/humu.23170. Epub 2017 Jan 23.
9
Mechanism and Regulation of Protein Synthesis in Saccharomyces cerevisiae.酿酒酵母中蛋白质合成的机制与调控
Genetics. 2016 May;203(1):65-107. doi: 10.1534/genetics.115.186221.
10
Divergent Alanyl-tRNA Synthetase Genes of Vanderwaltozyma polyspora Descended from a Common Ancestor through Whole-Genome Duplication Followed by Asymmetric Evolution.多孢范德酵母不同的丙氨酰 - tRNA合成酶基因起源于一个共同祖先,经历了全基因组复制,随后是不对称进化。
Mol Cell Biol. 2015 Jul;35(13):2242-53. doi: 10.1128/MCB.00018-15. Epub 2015 Apr 20.
酵母HIS4区域的核苷酸序列。
Gene. 1982 Apr;18(1):47-59. doi: 10.1016/0378-1119(82)90055-5.
4
Two differentially regulated mRNAs with different 5' ends encode secreted with intracellular forms of yeast invertase.两个具有不同5'端且差异调控的mRNA编码酵母转化酶的细胞内形式和分泌形式。
Cell. 1982 Jan;28(1):145-54. doi: 10.1016/0092-8674(82)90384-1.
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[Model of the secondary structure of eukaryotic ribosomal 18 S rRNA].
Dokl Akad Nauk SSSR. 1981;256(4):1006-10.
6
Evaluation of the "scanning model" for initiation of protein synthesis in eucaryotes.真核生物中蛋白质合成起始的“扫描模型”评估。
Cell. 1980 Nov;22(1 Pt 1):7-8. doi: 10.1016/0092-8674(80)90148-8.
7
Eukaryotic ribosomes can recognize preproinsulin initiation codons irrespective of their position relative to the 5' end of mRNA.真核生物核糖体能够识别胰岛素原起始密码子,而不论其相对于mRNA 5'端的位置如何。
Nature. 1982 Sep 16;299(5880):221-6. doi: 10.1038/299221a0.
8
Regulation of HIS4-lacZ fusions in Saccharomyces cerevisiae.酿酒酵母中HIS4-lacZ融合基因的调控
Mol Cell Biol. 1982 Oct;2(10):1212-9. doi: 10.1128/mcb.2.10.1212-1219.1982.
9
Point mutations close to the AUG initiator codon affect the efficiency of translation of rat preproinsulin in vivo.靠近AUG起始密码子的点突变会影响大鼠胰岛素原在体内的翻译效率。
Nature. 1984;308(5956):241-6. doi: 10.1038/308241a0.
10
Compilation and analysis of sequences upstream from the translational start site in eukaryotic mRNAs.真核生物mRNA翻译起始位点上游序列的汇编与分析。
Nucleic Acids Res. 1984 Jan 25;12(2):857-72. doi: 10.1093/nar/12.2.857.